RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	MYB	P10242	640 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CASP5	P51878	434 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ASIC1	P78348	528 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	KRT85	P78386	507 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	DNM1	Q05193	864 aa	Known RBP	13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SPAG1	Q07617	926 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	KCNA1	Q09470	495 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	PKP1	Q13835	747 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SURF1	Q15526	300 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	DSTYK	Q6XUX3	929 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	UNC13D	Q70J99	1090 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	BRSK2	Q8IWQ3	736 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	LEMD2	Q8NC56	503 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CACTIN	Q8WUQ7	758 aa	Known RBP	13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	DPP3	Q9NY33	737 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	TBC1D7	Q9P0N9	293 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CGN	Q9P2M7	1197 aa	Known RBP	13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	HSFX1	Q9UBD0	423 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CDH7	Q9ULB5	785 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	DUSP12	Q9UNI6	340 aa		13.63	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	DOCK8	Q8NF50	2099 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ANK1	P16157	1881 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	TISP43	B9A030	160 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	PRRG1	O14668	218 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ZNF197	O14709	1029 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	LRG1	P02750	347 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ASGR2	P07307	311 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SLFN14	P0C7P3	912 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	PTPN2	P17706	415 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CMA1	P23946	247 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	PLA2G5	P39877	138 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	TAF6	P49848	677 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	EHHADH	Q08426	723 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SMARCB1	Q12824	385 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	GPR17	Q13304	367 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	BECN1	Q14457	450 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FAM26F	Q5R3K3	315 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	OVOS1	Q6IE37	1185 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	MTSS1L	Q765P7	747 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CEP57L1	Q8IYX8	460 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FEZF2	Q8TBJ5	459 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ZNF507	Q8TCN5	953 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SENP8	Q96LD8	212 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	MYADM	Q96S97	322 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FAM213A	Q9BRX8	229 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	RBAK	Q9NYW8	714 aa	Predicted RBP	13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	GDE1	Q9NZC3	331 aa		13.62	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	PIEZO1	Q92508	2521 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CCL16	O15467	120 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CPB1	P15086	417 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	PLD1	Q13393	1074 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SV2C	Q496J9	727 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	PABPC1L	Q4VXU2	614 aa	Known RBP	13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	IQCE	Q6IPM2	695 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ARMCX5	Q6P1M9	558 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	GET4	Q7L5D6	327 aa	Predicted RBP	13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	GPD1L	Q8N335	351 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ELMOD1	Q8N336	334 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SPATA18	Q8TC71	538 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FAM122A	Q96E09	287 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ZNF560	Q96MR9	790 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CYP4F11	Q9HBI6	524 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	WNT16	Q9UBV4	365 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ITGA11	Q9UKX5	1188 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	POLI	Q9UNA4	740 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	INSL5	Q9Y5Q6	135 aa		13.61	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FAM237A	A0A1B0GTK4	181 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ZNF233	A6NK53	670 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	PRPF6	O94906	941 aa	Known RBP	13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SRF	P11831	508 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CLCN5	P51795	746 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ARPP19	P56211	112 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	PSMD2	Q13200	908 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	HTR4	Q13639	388 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	BMT2	Q1RMZ1	405 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	METTL23	Q86XA0	190 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	THEM5	Q8N1Q8	247 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SLC44A3	Q8N4M1	653 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	LRRC52	Q8N7C0	313 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SPRYD3	Q8NCJ5	442 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	GOLGA5	Q8TBA6	731 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	C2orf15	Q8WU43	125 aa	Known RBP	13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	LEO1	Q8WVC0	666 aa	Predicted RBP	13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FGF13	Q92913	245 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SPATA32	Q96LK8	384 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	CBWD1	Q9BRT8	395 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	FGFBP2	Q9BYJ0	223 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	IRF2BPL	Q9H1B7	796 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	DNMT3B	Q9UBC3	853 aa	Known RBP	13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	ASB3	Q9Y575	518 aa		13.6	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	KPNA7	A9QM74	516 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	SPTLC1	O15269	473 aa		13.59	□□□□□ -0.23
CDK5RAP3-222	ENST00000581708	RHO	P08100	348 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms