RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 UBE4AQ14139 1066 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 FGL2Q14314 439 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 ANKS6Q68DC2 871 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 SWSAP1Q6NVH7 229 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 VRK3Q8IV63 474 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 MTFMTQ96DP5 389 aaKnown RBP5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 FAM167AQ96KS9 214 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 C11orf54Q9H0W9 315 aaPredicted RBP5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 PNPOQ9NVS9 261 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 TRPM5Q9NZQ8 1165 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 USP25Q9UHP3 1055 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 CPA4Q9UI42 421 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 PCDHA1Q9Y5I3 950 aa5.88□□□□□ -1.47
SMCHD1-205ENST00000581383 CXorf49A8MYA2 514 aaPredicted RBP5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 F2RL2O00254 374 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 GOLIM4O00461 696 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 CD1AP06126 327 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 SBK3P0C264 359 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 ATP5JP18859 108 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 FAM193AP78312 1265 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 GPSM2P81274 684 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 MAEAQ7L5Y9 396 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 ZNF575Q86XF7 245 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 PLXDC1Q8IUK5 500 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 LCORLQ8N3X6 602 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 SUPT20HQ8NEM7 779 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 LENG9Q96B70 501 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 APOL5Q9BWW9 433 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 POGKQ9P215 609 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 FEZ2Q9UHY8 353 aaPredicted RBP5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 CLCA2Q9UQC9 943 aa5.87□□□□□ -1.47
SMCHD1-205ENST00000581383 PNPLA7Q6ZV29 1317 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 ANO9A1A5B4 782 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 NT5C1B-RDH14C9J2C7 533 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 KIAA0391O15091 583 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 TRIM24O15164 1050 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 GRM6O15303 877 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 PMM2O15305 246 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 PQBP1O60828 265 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 PHKG2P15735 406 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 PRDX5P30044 214 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 CACNB3P54284 484 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 RHBDL3P58872 404 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 RAP2BP61225 183 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 MXRA7P84157 204 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 PICALMQ13492 652 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 SEMA5AQ13591 1074 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 ATP2B3Q16720 1220 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 OTUD7BQ6GQQ9 843 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 ZNF529Q6P280 563 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 LRRC55Q6ZSA7 311 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 UBE3BQ7Z3V4 1068 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 PPP1R3BQ86XI6 285 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 CELF5Q8N6W0 485 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 LRTOMTQ8WZ04 291 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 TNPO1Q92973 898 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 MLST8Q9BVC4 326 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 WDCPQ9H6R7 721 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 ZMAT3Q9HA38 289 aaKnown RBP5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 PCDHA6Q9UN73 950 aa5.86□□□□□ -1.47
SMCHD1-205ENST00000581383 A0A1W2PPL8 197 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 TBKBP1A7MCY6 615 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 B5MCH6 92 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 MYL3P08590 195 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 SNRPA1P09661 255 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 FTH1P19P0C7X4 201 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 PEX2P28328 305 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 PHKA1P46020 1223 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 CLRN1P58418 232 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 VPS72Q15906 364 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 PABPC1LQ4VXU2 614 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 KHDC1LQ5JSQ8 128 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 DACT2Q5SW24 774 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 STRIP1Q5VSL9 837 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 APOA5Q6Q788 366 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 SEM1Q6ZVN7 128 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 SVIPQ8NHG7 77 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 PARD3BQ8TEW8 1205 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 DCLRE1CQ96SD1 692 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 C1orf43Q9BWL3 253 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 LSM14BQ9BX40 385 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 MRPL46Q9H2W6 279 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 ATP6V0A4Q9HBG4 840 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 SLAMF7Q9NQ25 335 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 PACSIN3Q9UKS6 424 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 TPCN1Q9ULQ1 816 aa5.85□□□□□ -1.47
SMCHD1-205ENST00000581383 PJA2O43164 708 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 PHGDHO43175 533 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 MGEA5O60502 916 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 AHSGP02765 367 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 KITP10721 976 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 MTHFD1P11586 935 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 KRT4P19013 534 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 APOBEC3AP31941 199 aaPredicted RBP5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 BIRC2Q13490 618 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 BMT2Q1RMZ1 405 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 C1QL3Q5VWW1 255 aa5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 NAIF1Q69YI7 327 aaPredicted RBP5.84□□□□□ -1.47
SMCHD1-205ENST00000581383 FAM90A1Q86YD7 464 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms