RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 KIF26AQ9ULI4 1882 aaPredicted RBP14.57□□□□□ -0.08
TRAF4-214ENST00000580073 PP2D1A8MPX8 630 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 E9PMD0 336 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 SLC16A4O15374 487 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 CLDN3O15551 220 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 TBC1D4O60343 1298 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 PLS3P13797 630 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 PSMC3P17980 439 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 PAX3P23760 479 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 TARSP26639 723 aaKnown RBP14.56□□□□□ -0.08
TRAF4-214ENST00000580073 CCR3P51677 355 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 CEBPZQ03701 1054 aaKnown RBP14.56□□□□□ -0.08
TRAF4-214ENST00000580073 PPP2R3AQ06190 1150 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 MRPL58Q14197 206 aaKnown RBP14.56□□□□□ -0.08
TRAF4-214ENST00000580073 RINT1Q6NUQ1 792 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 CD300LGQ6UXG3 332 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 USP37Q86T82 979 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 SUMF1Q8NBK3 374 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 DDX12PQ92771 950 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 SMARCD2Q92925 531 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 RMDN1Q96DB5 314 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 ASB16Q96NS5 453 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 EPC1Q9H2F5 836 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 HEBP1Q9NRV9 189 aa14.56□□□□□ -0.08
TRAF4-214ENST00000580073 SMG5Q9UPR3 1016 aaKnown RBP14.56□□□□□ -0.08
TRAF4-214ENST00000580073 OBSL1O75147 1896 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 SLC26A4O43511 780 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 LRRN2O75325 713 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 FGF19O95750 216 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 CDC25AP30304 524 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 LMNB2Q03252 620 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 TWF1Q12792 350 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 C1orf186Q6ZWK4 172 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 YAF2Q8IY57 180 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 MAML2Q8IZL2 1156 aaPredicted RBP14.55□□□□□ -0.08
TRAF4-214ENST00000580073 DAW1Q8N136 415 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 ZBTB44Q8NCP5 570 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 ZMAT2Q96NC0 199 aaKnown RBP14.55□□□□□ -0.08
TRAF4-214ENST00000580073 NTPCRQ9BSD7 190 aaKnown RBP14.55□□□□□ -0.08
TRAF4-214ENST00000580073 MMTAG2Q9BU76 263 aaKnown RBP14.55□□□□□ -0.08
TRAF4-214ENST00000580073 RUSC1Q9BVN2 902 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 CHRDQ9H2X0 955 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 SLITRK6Q9H5Y7 841 aa14.55□□□□□ -0.08
TRAF4-214ENST00000580073 UBQLN1Q9UMX0 589 aaKnown RBP14.55□□□□□ -0.08
TRAF4-214ENST00000580073 OR6C75A6NL08 312 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 PRR5-ARHGAP8B1AHC4 643 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 ABLIM1O14639 778 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 ZNF263O14978 683 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 LILRB5O75023 590 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 CYP3A5P20815 502 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 FCARP24071 287 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 LRPAP1P30533 357 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 EPHA5P54756 1037 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 MLLT6P55198 1093 aaPredicted RBP14.54□□□□□ -0.08
TRAF4-214ENST00000580073 ARHGAP8P85298 464 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 MCL1Q07820 350 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 MAPK7Q13164 816 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 LRRC32Q14392 662 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 ZRSR1Q15695 479 aaKnown RBP14.54□□□□□ -0.08
TRAF4-214ENST00000580073 FAM78AQ5JUQ0 283 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 HYIQ5T013 277 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 TANGO2Q6ICL3 276 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 TAS1R3Q7RTX0 852 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 CSGALNACT1Q8TDX6 532 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 FAM3CQ92520 227 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 TRPV4Q9HBA0 871 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 POLD4Q9HCU8 107 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 ODF2LQ9ULJ1 636 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 MTF2Q9Y483 593 aaPredicted RBP14.54□□□□□ -0.08
TRAF4-214ENST00000580073 GREB1Q4ZG55 1949 aa14.54□□□□□ -0.08
TRAF4-214ENST00000580073 F5P12259 2224 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 SPAG17Q6Q759 2223 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 M0QZQ0 153 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 CLTAP09496 248 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 CXCL8P10145 99 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 MAPTP10636 758 aaKnown RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 MYL4P12829 197 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 CD72P21854 359 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 GDI1P31150 447 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 NASPP49321 788 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 LIG4P49917 911 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 EPHB3P54753 998 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 DNM1Q05193 864 aaKnown RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 GRM2Q14416 872 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 ARL6IP4Q66PJ3 421 aaKnown RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 MAMSTRQ6ZN01 415 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 HAUS6Q7Z4H7 955 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 CD302Q8IX05 232 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 SYT2Q8N9I0 419 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 TMEM161BQ8NDZ6 487 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 ZSCAN18Q8TBC5 510 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 FAM200AQ8TCP9 573 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 NELL1Q92832 810 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 C18orf25Q96B23 403 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 KIF12Q96FN5 646 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 ZNF334Q9HCZ1 680 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 DLL3Q9NYJ7 618 aa14.53□□□□□ -0.08
TRAF4-214ENST00000580073 FBXO2Q9UK22 296 aaPredicted RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 CDV3Q9UKY7 258 aaKnown RBP14.53□□□□□ -0.08
TRAF4-214ENST00000580073 NDRG2Q9UN36 371 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms