RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 BCL7CQ8WUZ0 217 aaPredicted RBP13.05□□□□□ -0.32
IFT20-207ENST00000578547 TGS1Q96RS0 853 aaKnown RBP13.05□□□□□ -0.32
IFT20-207ENST00000578547 LSM14BQ9BX40 385 aaKnown RBP13.05□□□□□ -0.32
IFT20-207ENST00000578547 TRIM5Q9C035 493 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 XPO4Q9C0E2 1151 aaKnown RBP13.05□□□□□ -0.32
IFT20-207ENST00000578547 CERS4Q9HA82 394 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
IFT20-207ENST00000578547 MARCH5Q9NX47 278 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 NXF1Q9UBU9 619 aaKnown RBP13.05□□□□□ -0.32
IFT20-207ENST00000578547 ADAM28Q9UKQ2 775 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 PCDHB12Q9Y5F1 795 aa13.05□□□□□ -0.32
IFT20-207ENST00000578547 PMM2O15305 246 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 AP5Z1O43299 807 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 CBFA2T2O43439 604 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 ASS1P00966 412 aaKnown RBP13.04□□□□□ -0.32
IFT20-207ENST00000578547 TPM3P06753 285 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 SLC9A1P19634 815 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 ATICP31939 592 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 PPM1AP35813 382 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 KLK7P49862 253 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 LILRA4P59901 499 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 TNNC1P63316 161 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 APBA1Q02410 837 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 SYCP1Q15431 976 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 SGSM1Q2NKQ1 1148 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 UVSSAQ2YD98 709 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 ZNF667Q5HYK9 610 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 DSTYKQ6XUX3 929 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 SLC39A11Q8N1S5 342 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 EHBP1Q8NDI1 1231 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 TMEM169Q96HH4 297 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 XYLT2Q9H1B5 865 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 SPG21Q9NZD8 308 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 POLIQ9UNA4 740 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 COQ4Q9Y3A0 265 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 SNX9Q9Y5X1 595 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
IFT20-207ENST00000578547 GTPBP10A4D1E9 387 aaKnown RBP13.03□□□□□ -0.32
IFT20-207ENST00000578547 EPOPA6NHQ4 379 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 KPNA7A9QM74 516 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 TMEM189-UBE2V1I3L0A0 370 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 CSPG5O95196 566 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 PON1P27169 355 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 NR1I3Q14994 352 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 WDR72Q3MJ13 1102 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 TIGD5Q53EQ6 642 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 FUT10Q6P4F1 479 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 TRIM65Q6PJ69 517 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 SARM1Q6SZW1 724 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 CD300LGQ6UXG3 332 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 ARHGEF19Q8IW93 802 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 KLHL23Q8NBE8 558 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 ARNTL2Q8WYA1 636 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 TAF4BQ92750 862 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 TATDN2Q93075 761 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 IGSF21Q96ID5 467 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 SENP8Q96LD8 212 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 NT5C1BQ96P26 610 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 MMS19Q96T76 1030 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 NIF3L1Q9GZT8 377 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 TTYH1Q9H313 450 aaPredicted RBP13.03□□□□□ -0.32
IFT20-207ENST00000578547 ZNF576Q9H609 170 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 GRPEL1Q9HAV7 217 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 APOBEC3GQ9HC16 384 aaKnown RBP13.03□□□□□ -0.32
IFT20-207ENST00000578547 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
IFT20-207ENST00000578547 RWDD3Q9Y3V2 267 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 SF3B1O75533 1304 aaKnown RBP eCLIP13.03□□□□□ -0.32
IFT20-207ENST00000578547 NLRC5Q86WI3 1866 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 SCN1AP35498 2009 aa13.03□□□□□ -0.32
IFT20-207ENST00000578547 LAMA3Q16787 3333 aa13.02□□□□□ -0.32
IFT20-207ENST00000578547 FSD2A1L4K1 749 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 C5orf67F2Z3F1 127 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 RFXAPO00287 272 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 CYB561D2O14569 222 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 FGF18O76093 207 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 RB1P06400 928 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 ODC1P11926 461 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 P4HA1P13674 534 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 RAP1GAPP47736 663 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 KCNMA1Q12791 1236 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 FAM171A1Q5VUB5 890 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 GJB7Q6PEY0 223 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 CEP57Q86XR8 500 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 PPM1KQ8N3J5 372 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 LMO3Q8TAP4 145 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 B3GALT6Q96L58 329 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 SAMD11Q96NU1 681 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 ARID3AQ99856 593 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 PLVAPQ9BX97 442 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 GPR62Q9BZJ7 368 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 SMYD3Q9H7B4 428 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 ALG13Q9NP73 1137 aaKnown RBP13.02□□□□□ -0.33
IFT20-207ENST00000578547 SIK3Q9Y2K2 1263 aa13.02□□□□□ -0.33
IFT20-207ENST00000578547 TIMM13Q9Y5L4 95 aaPredicted RBP13.02□□□□□ -0.33
IFT20-207ENST00000578547 CARNS1A5YM72 827 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 HUS1O60921 280 aa13.01□□□□□ -0.33
IFT20-207ENST00000578547 STAU1O95793 577 aaKnown RBP13.01□□□□□ -0.33
IFT20-207ENST00000578547 ASPAP45381 313 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms