RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 ANO10Q9NW15 660 aa10.31□□□□□ -0.76
CCDC40-214ENST00000575431 GDAP2Q9NXN4 497 aa10.31□□□□□ -0.76
CCDC40-214ENST00000575431 MTRRQ9UBK8 725 aa10.31□□□□□ -0.76
CCDC40-214ENST00000575431 CACNG4Q9UBN1 327 aa10.31□□□□□ -0.76
CCDC40-214ENST00000575431 ARMCX3Q9UH62 379 aaPredicted RBP10.31□□□□□ -0.76
CCDC40-214ENST00000575431 AGAP1Q9UPQ3 857 aa10.31□□□□□ -0.76
CCDC40-214ENST00000575431 TRIM49BA6NDI0 452 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 LRRIQ3A6PVS8 624 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-214ENST00000575431 C2CD2LO14523 706 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 HUS1O60921 280 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 CLASP2O75122 1294 aaKnown RBP10.3□□□□□ -0.76
CCDC40-214ENST00000575431 OAZ2O95190 189 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 CNPP09543 421 aaKnown RBP10.3□□□□□ -0.76
CCDC40-214ENST00000575431 KLRC2P26717 231 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 GUCY2FP51841 1108 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 PMS1P54277 932 aaKnown RBP10.3□□□□□ -0.76
CCDC40-214ENST00000575431 YWHAHQ04917 246 aaPredicted RBP10.3□□□□□ -0.76
CCDC40-214ENST00000575431 HYAL1Q12794 435 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 ADAM15Q13444 863 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 BIRC3Q13489 604 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 MRPL58Q14197 206 aaKnown RBP10.3□□□□□ -0.76
CCDC40-214ENST00000575431 CTC1Q2NKJ3 1217 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 ZACNQ401N2 412 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 VARS2Q5ST30 1063 aaKnown RBP10.3□□□□□ -0.76
CCDC40-214ENST00000575431 ZNF280DQ6N043 979 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 TAS1R1Q7RTX1 841 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 ADGRD2Q7Z7M1 963 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 RBM23Q86U06 439 aaKnown RBP10.3□□□□□ -0.76
CCDC40-214ENST00000575431 METTL23Q86XA0 190 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 OR5B17Q8NGF7 314 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 HDAC7Q8WUI4 952 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 PPM1EQ8WY54 764 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 TAF4BQ92750 862 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 HLA-CQ95604 372 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 BORCS6Q96GS4 357 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 POP1Q99575 1024 aaKnown RBP10.3□□□□□ -0.76
CCDC40-214ENST00000575431 CTNND2Q9UQB3 1225 aa10.3□□□□□ -0.76
CCDC40-214ENST00000575431 ATG2AQ2TAZ0 1938 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 OR6C75A6NL08 312 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 I3L4J1 428 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 PER2O15055 1255 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 TEX28O15482 410 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 CSPG5O95196 566 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 C4BPAP04003 597 aaKnown RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 CYP11A1P05108 521 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 CCDC192P0DO97 292 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 HOXB8P17481 243 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 TKTP29401 623 aaKnown RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 MARSP56192 900 aaKnown RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 KCNC3Q14003 757 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 RAB33AQ14088 237 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 TPD52L1Q16890 204 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 SGSM1Q2NKQ1 1148 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 PUS10Q3MIT2 529 aaKnown RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 DPCR1Q3MIW9 517 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 CCDC40Q4G0X9 1142 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 LMBRD2Q68DH5 695 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 KRT39Q6A163 491 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 SLC8B1Q6J4K2 584 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 SV2AQ7L0J3 742 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 RTL10Q7L3V2 364 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 FAM114A1Q8IWE2 563 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 THEM5Q8N1Q8 247 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 TMEM86AQ8N2M4 240 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 CCDC150Q8NCX0 1101 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 CXorf38Q8TB03 319 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 PLEKHO2Q8TD55 490 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 SLC22A17Q8WUG5 538 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 AUTS2Q8WXX7 1259 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 ZNF516Q92618 1163 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 HPDLQ96IR7 371 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 FAXDC2Q96IV6 333 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 SENP8Q96LD8 212 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 DUSP9Q99956 384 aaKnown RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 GZF1Q9H116 711 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 PLEKHA4Q9H4M7 779 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 IGFLR1Q9H665 355 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 UBE2ZQ9H832 354 aaPredicted RBP10.29□□□□□ -0.76
CCDC40-214ENST00000575431 VRTNQ9H8Y1 702 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 TMEM8AQ9HCN3 771 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 DZANK1Q9NVP4 752 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 CLDND1Q9NY35 253 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 SIX4Q9UIU6 781 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 MAFFQ9ULX9 164 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 HCFC2Q9Y5Z7 792 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 PTPRJQ12913 1337 aa10.29□□□□□ -0.76
CCDC40-214ENST00000575431 PRRC2BQ5JSZ5 2229 aaKnown RBP10.28□□□□□ -0.76
CCDC40-214ENST00000575431 CYB561D2O14569 222 aa10.28□□□□□ -0.76
CCDC40-214ENST00000575431 PPEF2O14830 753 aa10.28□□□□□ -0.76
CCDC40-214ENST00000575431 SPTLC1O15269 473 aa10.28□□□□□ -0.76
CCDC40-214ENST00000575431 N4BP1O75113 896 aaKnown RBP10.28□□□□□ -0.76
CCDC40-214ENST00000575431 SLC34A2O95436 690 aa10.28□□□□□ -0.76
CCDC40-214ENST00000575431 GLUD1P00367 558 aa10.28□□□□□ -0.76
CCDC40-214ENST00000575431 CST3P01034 146 aaPredicted RBP10.28□□□□□ -0.76
CCDC40-214ENST00000575431 P4HA1P13674 534 aa10.28□□□□□ -0.76
CCDC40-214ENST00000575431 LHX1P48742 406 aa10.28□□□□□ -0.76
CCDC40-214ENST00000575431 CLCN4P51793 760 aa10.28□□□□□ -0.76
CCDC40-214ENST00000575431 STX17P56962 302 aa10.28□□□□□ -0.76
CCDC40-214ENST00000575431 DLG4P78352 724 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms