RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 KRT19P08727 400 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 CHRNA3P32297 505 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 HSPA9P38646 679 aaKnown RBP14.97□□□□□ -0.01
VPS33B-208ENST00000574755 FKBP1BP68106 108 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 PPP1R2P3Q6NXS1 205 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 MMS22LQ6ZRQ5 1243 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 SLC13A5Q86YT5 568 aaPredicted RBP14.97□□□□□ -0.01
VPS33B-208ENST00000574755 IQCKQ8N0W5 287 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 UBR7Q8N806 425 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 PRELID2Q8N945 189 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 MAGOHBQ96A72 148 aaKnown RBP14.97□□□□□ -0.01
VPS33B-208ENST00000574755 VCPIP1Q96JH7 1222 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 PARK7Q99497 189 aaKnown RBP14.97□□□□□ -0.01
VPS33B-208ENST00000574755 C16orf70Q9BSU1 422 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 TUT1Q9H6E5 874 aaKnown RBP14.97□□□□□ -0.01
VPS33B-208ENST00000574755 MRPL47Q9HD33 250 aaKnown RBP14.97□□□□□ -0.01
VPS33B-208ENST00000574755 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.97□□□□□ -0.01
VPS33B-208ENST00000574755 IL18RAPO95256 599 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 KRT14P02533 472 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 WEE2P0C1S8 567 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 SLC1A1P43005 524 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 POU5F1BQ06416 359 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 PPFIA1Q13136 1202 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 GRB14Q14449 540 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 PHF13Q86YI8 300 aaPredicted RBP14.96□□□□□ -0.01
VPS33B-208ENST00000574755 MAML3Q96JK9 1138 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 RASAL2Q9UJF2 1139 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 COL1A2P08123 1366 aa14.96□□□□□ -0.01
VPS33B-208ENST00000574755 TCRBV7S2A1N4TA0A589 114 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 FAM187AA6NFU0 413 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 GPR25O00155 361 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 CCDC137Q6PK04 289 aaKnown RBP14.96□□□□□ -0.02
VPS33B-208ENST00000574755 JAMLQ86YT9 394 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 ZDHHC14Q8IZN3 488 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 LINC01465Q8N7H1 131 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 C2orf69Q8N8R5 385 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 LRRC45Q96CN5 670 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 SCLT1Q96NL6 688 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 ERP44Q9BS26 406 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 XYLT2Q9H1B5 865 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.96□□□□□ -0.02
VPS33B-208ENST00000574755 SCINQ9Y6U3 715 aa14.96□□□□□ -0.02
VPS33B-208ENST00000574755 KAT6AQ92794 2004 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 ZEB2O60315 1214 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 BRD2P25440 801 aaKnown RBP14.95□□□□□ -0.02
VPS33B-208ENST00000574755 C1QBPQ07021 282 aaKnown RBP14.95□□□□□ -0.02
VPS33B-208ENST00000574755 MAMLD1Q13495 774 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 LLGL1Q15334 1064 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 FAM187BQ17R55 369 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 MTHFD1LQ6UB35 978 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 FAM76AQ8TAV0 307 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 NLRP7Q8WX94 980 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 PIK3R5Q8WYR1 880 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 CPB2Q96IY4 423 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 NXF1Q9UBU9 619 aaKnown RBP14.95□□□□□ -0.02
VPS33B-208ENST00000574755 ZHX1Q9UKY1 873 aaPredicted RBP14.95□□□□□ -0.02
VPS33B-208ENST00000574755 PROSCO94903 275 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 CELF2O95319 508 aaKnown RBP14.95□□□□□ -0.02
VPS33B-208ENST00000574755 STAG3L1P0CL83 205 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 SMPD1P17405 629 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 CAPN2P17655 700 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 ASPAP45381 313 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 TNFAIP2Q03169 654 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 AMHR2Q16671 573 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 FAM110CQ1W6H9 321 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 DAB2IPQ5VWQ8 1189 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 SPRYD7Q5W111 196 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 DUPD1Q68J44 220 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 PLEKHH3Q7Z736 793 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.95□□□□□ -0.02
VPS33B-208ENST00000574755 TINF2Q9BSI4 451 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 ABHD16BQ9H3Z7 469 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 PCYOX1Q9UHG3 505 aa14.95□□□□□ -0.02
VPS33B-208ENST00000574755 NFICP08651 508 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 MCF2P10911 925 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 FLT3P36888 993 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 HSD17B3P37058 310 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 PTP4A2Q12974 167 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 ACVR2BQ13705 512 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 DUSP28Q4G0W2 176 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 PLEKHA7Q6IQ23 1121 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 TTC27Q6P3X3 843 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 IFNLR1Q8IU57 520 aaPredicted RBP14.94□□□□□ -0.02
VPS33B-208ENST00000574755 CCDC105Q8IYK2 499 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 OR6J1Q8NGC5 347 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 PTPN18Q99952 460 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 PDZD7Q9H5P4 517 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 PARVAQ9NVD7 372 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 PLAAQ9Y263 795 aa14.94□□□□□ -0.02
VPS33B-208ENST00000574755 LACTBL1A8MY62 500 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 TLR3O15455 904 aaKnown RBP14.93□□□□□ -0.02
VPS33B-208ENST00000574755 ECM2O94769 699 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-208ENST00000574755 MMP3P08254 477 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 RARAP10276 462 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 ARF4P18085 180 aaPredicted RBP14.93□□□□□ -0.02
VPS33B-208ENST00000574755 MMP8P22894 467 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 GRIK4Q16099 956 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 CYP1B1Q16678 543 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 WDR72Q3MJ13 1102 aa14.93□□□□□ -0.02
VPS33B-208ENST00000574755 C1orf131Q8NDD1 294 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms