RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 HPS3Q969F9 1004 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 CHAMP1Q96JM3 812 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 FAM84AQ96KN4 292 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 RTP3Q9BQQ7 232 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 TRIM9Q9C026 710 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 TNMDQ9H2S6 317 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 MRPL44Q9H9J2 332 aaKnown RBP18.79■□□□□ 0.6
SMG6-212ENST00000573153 AVENQ9NQS1 362 aaPredicted RBP18.79■□□□□ 0.6
SMG6-212ENST00000573153 CDH7Q9ULB5 785 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 DERAQ9Y315 318 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 C2CD2Q9Y426 696 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 INSL5Q9Y5Q6 135 aa18.79■□□□□ 0.6
SMG6-212ENST00000573153 KRBA1A5PL33 1030 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 H7C4K7 107 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 MOSPD3O75425 235 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 OR4Q2P0C623 313 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 CCR2P41597 374 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 ALCAMQ13740 583 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 SLFN12LQ6IEE8 588 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 ZNF280DQ6N043 979 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 PARM1Q6UWI2 310 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 RNF19BQ6ZMZ0 732 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 CBWD1Q9BRT8 395 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 CFAP45Q9UL16 551 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 NUMBLQ9Y6R0 609 aa18.78■□□□□ 0.6
SMG6-212ENST00000573153 GCNT3O95395 438 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 TYMPP19971 482 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 TMEM132DQ14C87 1099 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 TPGS2Q68CL5 300 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 EPM2AIP1Q7L775 607 aaPredicted RBP18.77■□□□□ 0.6
SMG6-212ENST00000573153 BRSK2Q8IWQ3 736 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 SUGP1Q8IWZ8 645 aaKnown RBP18.77■□□□□ 0.6
SMG6-212ENST00000573153 APPL2Q8NEU8 664 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 OR10T2Q8NGX3 314 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 NXPE3Q969Y0 559 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 TMEM209Q96SK2 561 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 PHOX2BQ99453 314 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 LRRC3Q9BY71 257 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 LRRC27Q9C0I9 530 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 MAGEF1Q9HAY2 307 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 PANK4Q9NVE7 773 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 CEP72Q9P209 647 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 AFF4Q9UHB7 1163 aaKnown RBP18.77■□□□□ 0.6
SMG6-212ENST00000573153 RCOR1Q9UKL0 485 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 KCNH3Q9ULD8 1083 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 PCDHA7Q9UN72 937 aa18.77■□□□□ 0.6
SMG6-212ENST00000573153 COL4A2P08572 1712 aa18.77■□□□□ 0.59
SMG6-212ENST00000573153 PI15O43692 258 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 XYLBO75191 536 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 PRPF6O94906 941 aaKnown RBP18.76■□□□□ 0.59
SMG6-212ENST00000573153 CYP11A1P05108 521 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 RHOP08100 348 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 IDEP14735 1019 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 ARPP19P56211 112 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 YWHAHQ04917 246 aaPredicted RBP18.76■□□□□ 0.59
SMG6-212ENST00000573153 FOXD4L6Q3SYB3 417 aaPredicted RBP18.76■□□□□ 0.59
SMG6-212ENST00000573153 PABPC1LQ4VXU2 614 aaKnown RBP18.76■□□□□ 0.59
SMG6-212ENST00000573153 FOXD4L3Q6VB84 417 aaPredicted RBP18.76■□□□□ 0.59
SMG6-212ENST00000573153 IQUBQ8NA54 791 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 DHX58Q96C10 678 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 SAAL1Q96ER3 474 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 SENP8Q96LD8 212 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 ACCSQ96QU6 501 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 DNAJC25Q9H1X3 360 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 PCDHB13Q9Y5F0 798 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 ZFP37Q9Y6Q3 630 aaPredicted RBP18.76■□□□□ 0.59
SMG6-212ENST00000573153 CACNA1HO95180 2353 aa18.76■□□□□ 0.59
SMG6-212ENST00000573153 SRFP11831 508 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 CEBPBP17676 345 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 GARTP22102 1010 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 FCARP24071 287 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 CASP1P29466 404 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 EPHA5P54756 1037 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 DNM1Q05193 864 aaKnown RBP18.75■□□□□ 0.59
SMG6-212ENST00000573153 ADCY1Q08828 1119 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 POSTNQ15063 836 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 RESP18Q5W5W9 173 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 TTC9BQ8N6N2 239 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 POMGNT1Q8WZA1 660 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 TCEAL4Q96EI5 215 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 FAM212AQ96EL1 285 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 CYP4F11Q9HBI6 524 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 SLC2A4RGQ9NR83 387 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 WNT16Q9UBV4 365 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 POLIQ9UNA4 740 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 EXOC7Q9UPT5 735 aa18.75■□□□□ 0.59
SMG6-212ENST00000573153 NCANO14594 1321 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 PTPRJQ12913 1337 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 TCHHQ07283 1943 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 XPOTO43592 962 aaKnown RBP18.74■□□□□ 0.59
SMG6-212ENST00000573153 PAX3P23760 479 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 AMPD3Q01432 767 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 GPR17Q13304 367 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 ASTLQ6HA08 431 aaPredicted RBP18.74■□□□□ 0.59
SMG6-212ENST00000573153 TMC8Q8IU68 726 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 CCDC65Q8IXS2 484 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 HS6ST3Q8IZP7 471 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 C1orf127Q8N9H9 656 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 SPRYD3Q8NCJ5 442 aa18.74■□□□□ 0.59
SMG6-212ENST00000573153 GPR152Q8TDT2 470 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms