RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	KIAA0319	Q5VV43	1072 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	SCARA3	Q6AZY7	606 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	DSTYK	Q6XUX3	929 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	TRAPPC11	Q7Z392	1133 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	FILIP1	Q7Z7B0	1213 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	RBM23	Q86U06	439 aa	Known RBP	12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	MRPL43	Q8N983	215 aa	Known RBP	12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	CXorf38	Q8TB03	319 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	RIN2	Q8WYP3	895 aa	Predicted RBP	12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	SUSD3	Q96L08	255 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	SRRT	Q9BXP5	876 aa	Known RBP	12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	IGFLR1	Q9H665	355 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	TLE6	Q9H808	572 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	MMRN2	Q9H8L6	949 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	CHST7	Q9NS84	486 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	PCDHB8	Q9UN66	801 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	IRAK3	Q9Y616	596 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	DOCK8	Q8NF50	2099 aa		12.47	□□□□□ -0.41
ATP2A3-208	ENST00000570845	KPNA7	A9QM74	516 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845		M0QZQ0	153 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	IKBKB	O14920	756 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	PER2	O15055	1255 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	FGFR1OP	O95684	399 aa	Known RBP	12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	PAX3	P23760	479 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	ERCC5	P28715	1186 aa	Predicted RBP	12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	AARS	P49588	968 aa	Known RBP eCLIP	12.46	□□□□□ -0.41	1e-6	■■■■■ 36.1
ATP2A3-208	ENST00000570845	ENPEP	Q07075	957 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	HYAL1	Q12794	435 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	NFKBIB	Q15653	356 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	PSMD5	Q16401	504 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	TPD52L1	Q16890	204 aa	Predicted RBP	12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	DCAF17	Q5H9S7	520 aa	Predicted RBP	12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	C1orf220	Q5T0J3	134 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	TCERG1L	Q5VWI1	586 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	TDRD10	Q5VZ19	366 aa	Known RBP	12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	PRSS55	Q6UWB4	352 aa	Predicted RBP	12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	LRRC52	Q8N7C0	313 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	BORCS6	Q96GS4	357 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	SENP8	Q96LD8	212 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	MED15	Q96RN5	788 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	EMILIN2	Q9BXX0	1053 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	ANO10	Q9NW15	660 aa		12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	ARMCX3	Q9UH62	379 aa	Predicted RBP	12.46	□□□□□ -0.41
ATP2A3-208	ENST00000570845	MYO10	Q9HD67	2058 aa		12.46	□□□□□ -0.42
ATP2A3-208	ENST00000570845	SYN3	O14994	580 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	STX10	O60499	249 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	LILRB3	O75022	631 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	CLSTN1	O94985	981 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	C4BPA	P04003	597 aa	Known RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	CNP	P09543	421 aa	Known RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	ODC1	P11926	461 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	RPL17	P18621	184 aa	Known RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	GCLM	P48507	274 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	CREM	Q03060	361 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	TYRO3	Q06418	890 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	PPP3CA	Q08209	521 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	MYO1E	Q12965	1108 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	TRPC3	Q13507	836 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	SKIV2L	Q15477	1246 aa	Known RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	DUSP6	Q16828	381 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	ZACN	Q401N2	412 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	VARS2	Q5ST30	1063 aa	Known RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	PDXDC1	Q6P996	788 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	C11orf57	Q6ZUT1	292 aa	Predicted RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	ANKS3	Q6ZW76	656 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	FRMD5	Q7Z6J6	570 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	GLYCTK	Q8IVS8	523 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	APPL2	Q8NEU8	664 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	LNX1	Q8TBB1	728 aa	Predicted RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	PIK3R5	Q8WYR1	880 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	HPDL	Q96IR7	371 aa		12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	METTL14	Q9HCE5	456 aa	Known RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	TIMM13	Q9Y5L4	95 aa	Predicted RBP	12.45	□□□□□ -0.42
ATP2A3-208	ENST00000570845	XIRP2	A4UGR9	3374 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	ARHGEF37	A1IGU5	675 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	SYCE3	A1L190	88 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	CYB561D2	O14569	222 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	TEX28	O15482	410 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	CLASP2	O75122	1294 aa	Known RBP	12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	LETM1	O95202	739 aa	Predicted RBP	12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	VNN1	O95497	513 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	GNA14	O95837	355 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	CST3	P01034	146 aa	Predicted RBP	12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	ADH1A	P07327	375 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	CCDC192	P0DO97	292 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	KLRC2	P26717	231 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	PIK3CA	P42336	1068 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	NDUFV1	P49821	464 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	MCCD1	P59942	119 aa	Predicted RBP	12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	MYL6	P60660	151 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	NCOA4	Q13772	614 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	LLGL2	Q6P1M3	1020 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	C15orf39	Q6ZRI6	1047 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	EP400NL	Q6ZTU2	488 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	SV2A	Q7L0J3	742 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	GPR65	Q8IYL9	337 aa		12.44	□□□□□ -0.42
ATP2A3-208	ENST00000570845	CNOT6L	Q96LI5	555 aa	Known RBP	12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms