RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 LGALS4P56470 323 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 FKBP1AP62942 108 aaKnown RBP8.09□□□□□ -1.11
CNOT1-222ENST00000570139 PTH1RQ03431 593 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 ALX1Q15699 326 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 CCDC93Q567U6 631 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 VPS53Q5VIR6 699 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 WDR78Q5VTH9 848 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 NAA16Q6N069 864 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-222ENST00000570139 KIAA1841Q6NSI8 718 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 DZIP1Q86YF9 867 aaKnown RBP8.09□□□□□ -1.11
CNOT1-222ENST00000570139 OR2C3Q8N628 320 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 HIPK4Q8NE63 616 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 ATXN2LQ8WWM7 1075 aaKnown RBP8.09□□□□□ -1.11
CNOT1-222ENST00000570139 LRTOMTQ8WZ04 291 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 SEC14L1Q92503 715 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 ERCC4Q92889 916 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-222ENST00000570139 ASIC4Q96FT7 647 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 SCARF2Q96GP6 870 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-222ENST00000570139 TBCBQ99426 244 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 SSBP4Q9BWG4 385 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-222ENST00000570139 ALDH8A1Q9H2A2 487 aaPredicted RBP8.09□□□□□ -1.11
CNOT1-222ENST00000570139 LRRC4CQ9HCJ2 640 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 PDLIM7Q9NR12 457 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 RAI14Q9P0K7 980 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 ABCF2Q9UG63 623 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 POLLQ9UGP5 575 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 POLHQ9Y253 713 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 IPPQ9Y573 584 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 PCDHB4Q9Y5E5 795 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 SNX14Q9Y5W7 946 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 CYP46A1Q9Y6A2 500 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 TAF6LQ9Y6J9 622 aa8.09□□□□□ -1.11
CNOT1-222ENST00000570139 ARFGEF1Q9Y6D6 1849 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 WDR19Q8NEZ3 1342 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 CHD4Q14839 1912 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 MAFGO15525 162 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 BAG3O95817 575 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 IGHA1P01876 353 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 NTRK1P04629 796 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 ALDH2P05091 517 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 MMEP08473 750 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 PCP11498 1178 aaKnown RBP8.08□□□□□ -1.12
CNOT1-222ENST00000570139 KLRK1P26718 216 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 COL8A1P27658 744 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 SARSP49591 514 aaKnown RBP8.08□□□□□ -1.12
CNOT1-222ENST00000570139 RTP1P59025 263 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 ROM1Q03395 351 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 MALLQ13021 153 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 POLD3Q15054 466 aaPredicted RBP8.08□□□□□ -1.12
CNOT1-222ENST00000570139 CNN3Q15417 329 aaKnown RBP8.08□□□□□ -1.12
CNOT1-222ENST00000570139 MAPRE1Q15691 268 aaKnown RBP8.08□□□□□ -1.12
CNOT1-222ENST00000570139 PAN2Q504Q3 1202 aaKnown RBP8.08□□□□□ -1.12
CNOT1-222ENST00000570139 PRR16Q569H4 304 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 PRAMEF9Q5VWM5 478 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 BLOC1S2Q6QNY1 142 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 RUFY3Q7L099 469 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 RTN4RL1Q86UN2 441 aaPredicted RBP8.08□□□□□ -1.12
CNOT1-222ENST00000570139 SHISA5Q8N114 240 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 NKAPQ8N5F7 415 aaKnown RBP8.08□□□□□ -1.12
CNOT1-222ENST00000570139 OR14C36Q8NHC7 312 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 ASB15Q8WXK1 588 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 NSUN4Q96CB9 384 aaKnown RBP8.08□□□□□ -1.12
CNOT1-222ENST00000570139 CGRRF1Q99675 332 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 G6PC3Q9BUM1 346 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 PALD1Q9ULE6 856 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 TELO2Q9Y4R8 837 aa8.08□□□□□ -1.12
CNOT1-222ENST00000570139 MYO3BQ8WXR4 1341 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 KRTAP9-6A0A140TA67 174 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 hCG_1642624A0A1W2PR95 340 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 CCDC154A6NI56 674 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 ZNF213O14771 459 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 RPLP2P05387 115 aaKnown RBP8.07□□□□□ -1.12
CNOT1-222ENST00000570139 HSP90AA1P07900 732 aaKnown RBP8.07□□□□□ -1.12
CNOT1-222ENST00000570139 CASTP20810 708 aaKnown RBP8.07□□□□□ -1.12
CNOT1-222ENST00000570139 MMP14P50281 582 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 ADCY2Q08462 1091 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 DGKKQ5KSL6 1271 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 THEMIS2Q5TEJ8 643 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 GALNT18Q6P9A2 607 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 KLHDC10Q6PID8 442 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 CILP2Q8IUL8 1156 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 TSPEARQ8WU66 669 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 LINC01599Q8WXQ3 324 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 FATE1Q969F0 183 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 TRIM63Q969Q1 353 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 HRASLS5Q96KN8 279 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 ZSCAN31Q96LW9 406 aaPredicted RBP8.07□□□□□ -1.12
CNOT1-222ENST00000570139 JAKMIP1Q96N16 626 aaKnown RBP8.07□□□□□ -1.12
CNOT1-222ENST00000570139 SEC62Q99442 399 aaKnown RBP8.07□□□□□ -1.12
CNOT1-222ENST00000570139 FOXB1Q99853 325 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 APOL5Q9BWW9 433 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 CRNKL1Q9BZJ0 848 aaKnown RBP8.07□□□□□ -1.12
CNOT1-222ENST00000570139 BTBD1Q9H0C5 482 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 NAPBQ9H115 298 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 PIM2Q9P1W9 311 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 FNIP2Q9P278 1114 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 IMPACTQ9P2X3 320 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 STXBP5LQ9Y2K9 1186 aa8.07□□□□□ -1.12
CNOT1-222ENST00000570139 ZNF646O15015 1829 aaPredicted RBP8.07□□□□□ -1.12
CNOT1-222ENST00000570139 FOCADQ5VW36 1801 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms