RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 CEP135Q66GS9 1140 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 HS2ST1Q7LGA3 356 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 USP37Q86T82 979 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 FMR1NBQ8N0W7 255 aaPredicted RBP9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 GJD3Q8N144 294 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 CSGALNACT2Q8N6G5 542 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 OR5B17Q8NGF7 314 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 SENP8Q96LD8 212 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 TMEM209Q96SK2 561 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 MTMR12Q9C0I1 747 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 ADAM7Q9H2U9 754 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 MMRN2Q9H8L6 949 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 RXFP1Q9HBX9 757 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 SCN1AP35498 2009 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 PTPRJQ12913 1337 aa9.76□□□□□ -0.85
GTF3C1-210ENST00000569394 FAM237AA0A1B0GTK4 181 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 TMEM189-UBE2V1I3L0A0 370 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 BIN1O00499 593 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 CYB561D2O14569 222 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 IL18RAPO95256 599 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 C8AP07357 584 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 LILRA4P59901 499 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 NTHL1P78549 312 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 ROR1Q01973 937 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 YWHAHQ04917 246 aaPredicted RBP9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 ZP2Q05996 745 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 FAM160A1Q05DH4 1040 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 DSG2Q14126 1118 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 SNRNP35Q16560 246 aaKnown RBP9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 CAMK4Q16566 473 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 PPM1LQ5SGD2 360 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 ATAT1Q5SQI0 421 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 LIN9Q5TKA1 542 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 CNNM4Q6P4Q7 775 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 TMEM184AQ6ZMB5 413 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 ANKS3Q6ZW76 656 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 BRSK2Q8IWQ3 736 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 CD302Q8IX05 232 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 PDCD7Q8N8D1 485 aaKnown RBP9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 XXYLT1Q8NBI6 393 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 SLC7A14Q8TBB6 771 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 PIK3R5Q8WYR1 880 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 SMG7Q92540 1137 aaKnown RBP9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 KCNN1Q92952 543 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 SUSD3Q96L08 255 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 FNBP1Q96RU3 617 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 ASB7Q9H672 318 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 EPHX3Q9H6B9 360 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 SFXN1Q9H9B4 322 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 CYP4F11Q9HBI6 524 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 STK39Q9UEW8 545 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 FBXL5Q9UKA1 691 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 R3HCC1Q9Y3T6 440 aaKnown RBP9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 C2orf16Q68DN1 1984 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 C5orf42Q9H799 3197 aa9.75□□□□□ -0.85
GTF3C1-210ENST00000569394 DOCK6Q96HP0 2047 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 WDR27A2RRH5 827 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 FAM86C2PA6NEL3 165 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 PIRO00625 290 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 PRRG1O14668 218 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 HCRTO43612 131 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 KINO60870 393 aaKnown RBP9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 HOXB8P17481 243 aaPredicted RBP9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 CYP3A5P20815 502 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 LRPAP1P30533 357 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 ELF1P32519 619 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 PLA2G5P39877 138 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 TAF6P49848 677 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 PSMD2Q13200 908 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 WSCD1Q658N2 575 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 OVOS1Q6IE37 1185 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 ZNF280DQ6N043 979 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 GET4Q7L5D6 327 aaPredicted RBP9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 GRASPQ7Z6J2 395 aaPredicted RBP9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 ADHFE1Q8IWW8 467 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 C1orf127Q8N9H9 656 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 APPL2Q8NEU8 664 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 ENGASEQ8NFI3 743 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 CACTINQ8WUQ7 758 aaKnown RBP9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 SMARCE1Q969G3 411 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 FAM122AQ96E09 287 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 ANKRD36BP1Q96IX9 119 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 RIPOR3Q96MK2 946 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 DZANK1Q9NVP4 752 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 HCFC1R1Q9NWW0 138 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 FNIP2Q9P278 1114 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 MTRRQ9UBK8 725 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 MUTYHQ9UIF7 546 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 SLC27A5Q9Y2P5 690 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 C2CD2Q9Y426 696 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 PCDHA5Q9Y5H7 936 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 NCOR1O75376 2440 aa9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 MTCL1Q9Y4B5 1905 aaKnown RBP9.74□□□□□ -0.85
GTF3C1-210ENST00000569394 FSD2A1L4K1 749 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 C2CD4DB7Z1M9 353 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 H7C4K7 107 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 DPYSL4O14531 572 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 SYN3O14994 580 aa9.73□□□□□ -0.85
GTF3C1-210ENST00000569394 PHACTR2O75167 634 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms