RNA–Protein interactions for RNA: ENST00000569095.1

CDH11-215, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-215ENST00000569095 LEFTY2O00292 366 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 TPP1O14773 563 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 SLC43A1O75387 559 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 HAUS5O94927 633 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 AGFG2O95081 481 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 SCAF4O95104 1147 aaKnown RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 AHSGP02765 367 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 MYL1P05976 194 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 SPATA31D3P0C874 917 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 CKBP12277 381 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 SLC6A2P23975 617 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 APOBEC3AP31941 199 aaPredicted RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 AGFG1P52594 562 aaKnown RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 CACNB3P54284 484 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 TBX4P57082 545 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 RNASE9P60153 205 aaKnown RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 PSMC1P62191 440 aaKnown RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 SLC25A3Q00325 362 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 CNN3Q15417 329 aaKnown RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 CSRP2Q16527 193 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 COBLL1Q53SF7 1204 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 SPATA31D4Q6ZUB0 917 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 MAEAQ7L5Y9 396 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 PPP1R3BQ86XI6 285 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 SLC17A8Q8NDX2 589 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 PLBD2Q8NHP8 589 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 LARP4BQ92615 738 aaKnown RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 IKZF4Q9H2S9 585 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 MRPL46Q9H2W6 279 aaKnown RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 PARPBPQ9NWS1 579 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 AURKAIP1Q9NWT8 199 aaPredicted RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 TRPM5Q9NZQ8 1165 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 FAM30AQ9NZY2 134 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 JKAMPQ9P055 326 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 CFAP97Q9P2B7 532 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 FAM50BQ9Y247 325 aa4.13□□□□□ -1.75
CDH11-215ENST00000569095 USP15Q9Y4E8 981 aaPredicted RBP4.13□□□□□ -1.75
CDH11-215ENST00000569095 THOC2Q8NI27 1593 aaKnown RBP4.12□□□□□ -1.75
CDH11-215ENST00000569095 KLRG2A4D1S0 409 aaPredicted RBP4.12□□□□□ -1.75
CDH11-215ENST00000569095 NT5C1B-RDH14C9J2C7 533 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 DIRC3C9JPN6 131 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 PHGDHO43175 533 aaKnown RBP4.12□□□□□ -1.75
CDH11-215ENST00000569095 MGEA5O60502 916 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 ZBED1O96006 694 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 GNAI2P04899 355 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 GJB1P08034 283 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 NBPF7P0C2Y1 421 aaPredicted RBP4.12□□□□□ -1.75
CDH11-215ENST00000569095 KITP10721 976 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 USP14P54578 494 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 FAM193AP78312 1265 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 FOXR2Q6PJQ5 311 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 ZNF627Q7L945 461 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 CHST15Q7LFX5 561 aaPredicted RBP4.12□□□□□ -1.75
CDH11-215ENST00000569095 FAM90A1Q86YD7 464 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 CCDC146Q8IYE0 955 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 KIAA0319LQ8IZA0 1049 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 PCSK9Q8NBP7 692 aaKnown RBP4.12□□□□□ -1.75
CDH11-215ENST00000569095 CPT1CQ8TCG5 803 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 NUP133Q8WUM0 1156 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 NT5C1BQ96P26 610 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 IMPG2Q9BZV3 1241 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 ZMAT3Q9HA38 289 aaKnown RBP4.12□□□□□ -1.75
CDH11-215ENST00000569095 RSAD1Q9HA92 442 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 PIH1D1Q9NWS0 290 aaKnown RBP4.12□□□□□ -1.75
CDH11-215ENST00000569095 ZDHHC8Q9ULC8 765 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 TPCN1Q9ULQ1 816 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 L1RE1Q9UN81 338 aa4.12□□□□□ -1.75
CDH11-215ENST00000569095 A6NNZ2 444 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 ZNF785A8K8V0 405 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 GOLIM4O00461 696 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 PLIN1O60240 522 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 ERN1O75460 977 aaKnown RBP4.11□□□□□ -1.75
CDH11-215ENST00000569095 PRSS23O95084 383 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 ANXA1P04083 346 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 RHCEP18577 417 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 HDCP19113 662 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 MAKP20794 623 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 SLC7A1P30825 629 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 SLC6A4P31645 630 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 SOX8P57073 446 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 MXRA7P84157 204 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 RHDQ02161 417 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 EXOSC9Q06265 439 aaKnown RBP4.11□□□□□ -1.75
CDH11-215ENST00000569095 FSTL1Q12841 308 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 SAFBQ15424 915 aaKnown RBP eCLIP4.11□□□□□ -1.75
CDH11-215ENST00000569095 RABL3Q5HYI8 236 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 C1QL3Q5VWW1 255 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 NAIF1Q69YI7 327 aaPredicted RBP4.11□□□□□ -1.75
CDH11-215ENST00000569095 ZNF365Q70YC5 407 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 PDSS2Q86YH6 399 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 SYT12Q8IV01 421 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 LRTOMTQ8WZ04 291 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 MARS2Q96GW9 593 aaKnown RBP4.11□□□□□ -1.75
CDH11-215ENST00000569095 PNKPQ96T60 521 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 SIK2Q9H0K1 926 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 NRDE2Q9H7Z3 1164 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.11□□□□□ -1.75
CDH11-215ENST00000569095 RLIMQ9NVW2 624 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 SLC45A2Q9UMX9 530 aa4.11□□□□□ -1.75
CDH11-215ENST00000569095 PCDHGB6Q9Y5F9 930 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms