RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 NTHL1P78549 312 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 ROR1Q01973 937 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 KCNA1Q09470 495 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 TMEM132DQ14C87 1099 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 E2F4Q16254 413 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 C9orf57Q5W0N0 161 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 CNNM4Q6P4Q7 775 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 SHC4Q6S5L8 630 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 CRELD2Q6UXH1 353 aaPredicted RBP7.5□□□□□ -1.21
SF3B3-209ENST00000567635 DSTYKQ6XUX3 929 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 STXBP4Q6ZWJ1 553 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 USP37Q86T82 979 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 TCEAL8Q8IYN2 117 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 TMEM130Q8N3G9 435 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 KCNG4Q8TDN1 519 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 RSAD2Q8WXG1 361 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 DHX58Q96C10 678 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 PRRX2Q99811 253 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 TNMDQ9H2S6 317 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 IKZF4Q9H2S9 585 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 SMOC2Q9H3U7 446 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 KBTBD4Q9NVX7 518 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 HCFC1R1Q9NWW0 138 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 DPP3Q9NY33 737 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 DNMT3BQ9UBC3 853 aaKnown RBP7.5□□□□□ -1.21
SF3B3-209ENST00000567635 RCOR1Q9UKL0 485 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 CDH7Q9ULB5 785 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 PCDHA7Q9UN72 937 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 MYH10P35580 1976 aa7.5□□□□□ -1.21
SF3B3-209ENST00000567635 MIA3Q5JRA6 1907 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 ANO9A1A5B4 782 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 WDR27A2RRH5 827 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 TULP1O00294 542 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 PIRO00625 290 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 PPEF2O14830 753 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 POLR2DO15514 142 aaKnown RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 SEC24AO95486 1093 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 PDGFBP01127 241 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 LRG1P02750 347 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 NFICP08651 508 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 TYMPP19971 482 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 GARTP22102 1010 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 AARSP49588 968 aaKnown RBP eCLIP7.49□□□□□ -1.219e-8■■■□□ 16
SF3B3-209ENST00000567635 CLCN6P51797 869 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 CASP5P51878 434 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 YWHAHQ04917 246 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 DNM1Q05193 864 aaKnown RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 ADCY1Q08828 1119 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 PABPC1LQ4VXU2 614 aaKnown RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 IER5LQ5T953 404 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 ZNF280DQ6N043 979 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 ARMCX5Q6P1M9 558 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 RNF19BQ6ZMZ0 732 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 GET4Q7L5D6 327 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 NT5DC4Q86YG4 428 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 ITFG1Q8TB96 612 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 CACTINQ8WUQ7 758 aaKnown RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 FGF13Q92913 245 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 SENP8Q96LD8 212 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 C7orf25Q9BPX7 421 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 FAM213AQ9BRX8 229 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 TRIM9Q9C026 710 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 MFSD1Q9H3U5 465 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 TMEM206Q9H813 350 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 CYP4F11Q9HBI6 524 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 FAM13BQ9NYF5 915 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 AFF4Q9UHB7 1163 aaKnown RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 FBXL21Q9UKT6 434 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 KCNH3Q9ULD8 1083 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 C2CD2Q9Y426 696 aa7.49□□□□□ -1.21
SF3B3-209ENST00000567635 TIMM13Q9Y5L4 95 aaPredicted RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 RIF1Q5UIP0 2472 aaKnown RBP7.49□□□□□ -1.21
SF3B3-209ENST00000567635 OR6C75A6NL08 312 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 ZNF197O14709 1029 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 SPTLC1O15269 473 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 NARSO43776 548 aaKnown RBP7.48□□□□□ -1.21
SF3B3-209ENST00000567635 EXTL3O43909 919 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 PRPF6O94906 941 aaKnown RBP7.48□□□□□ -1.21
SF3B3-209ENST00000567635 RHOP08100 348 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 CPB1P15086 417 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 CLCN5P51795 746 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 NUBP1P53384 320 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 VCPP55072 806 aaKnown RBP7.48□□□□□ -1.21
SF3B3-209ENST00000567635 ASIC1P78348 528 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 GPR17Q13304 367 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 HTR4Q13639 388 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 PKP1Q13835 747 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 MYBPC2Q14324 1141 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 RESP18Q5W5W9 173 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 ASTLQ6HA08 431 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-209ENST00000567635 OVOS1Q6IE37 1185 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 MTSS1LQ765P7 747 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 METTL23Q86XA0 190 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 ELMOD1Q8N336 334 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 ZSWIM2Q8NEG5 633 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 ZNF507Q8TCN5 953 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 HPS3Q969F9 1004 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 SAAL1Q96ER3 474 aa7.48□□□□□ -1.21
SF3B3-209ENST00000567635 ZNF512Q96ME7 567 aaPredicted RBP7.48□□□□□ -1.21
SF3B3-209ENST00000567635 CORO1BQ9BR76 489 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms