RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 POU5F1Q01860 360 aaKnown RBP17■□□□□ 0.31
CDH3-204ENST00000565453 YWHAHQ04917 246 aaPredicted RBP17■□□□□ 0.31
CDH3-204ENST00000565453 ADCY1Q08828 1119 aa17■□□□□ 0.31
CDH3-204ENST00000565453 KCNA1Q09470 495 aa17■□□□□ 0.31
CDH3-204ENST00000565453 C9orf57Q5W0N0 161 aa17■□□□□ 0.31
CDH3-204ENST00000565453 ADALQ6DHV7 355 aa17■□□□□ 0.31
CDH3-204ENST00000565453 RNF19BQ6ZMZ0 732 aa17■□□□□ 0.31
CDH3-204ENST00000565453 CCDC73Q6ZRK6 1079 aa17■□□□□ 0.31
CDH3-204ENST00000565453 MTSS1LQ765P7 747 aa17■□□□□ 0.31
CDH3-204ENST00000565453 LINC00301Q8NCQ3 95 aa17■□□□□ 0.31
CDH3-204ENST00000565453 ING5Q8WYH8 240 aa17■□□□□ 0.31
CDH3-204ENST00000565453 FAM212AQ96EL1 285 aa17■□□□□ 0.31
CDH3-204ENST00000565453 RTP3Q9BQQ7 232 aa17■□□□□ 0.31
CDH3-204ENST00000565453 ASB7Q9H672 318 aa17■□□□□ 0.31
CDH3-204ENST00000565453 AGO2Q9UKV8 859 aaKnown RBP17■□□□□ 0.31
CDH3-204ENST00000565453 MRPS23Q9Y3D9 190 aaKnown RBP17■□□□□ 0.31
CDH3-204ENST00000565453 NRG2O14511 850 aaPredicted RBP16.99■□□□□ 0.31
CDH3-204ENST00000565453 CEBPBP17676 345 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 STAT6P42226 847 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 CASP5P51878 434 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 LILRA4P59901 499 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 GPC5P78333 572 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 TMEM132DQ14C87 1099 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
CDH3-204ENST00000565453 CCDC105Q8IYK2 499 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 ATOH1Q92858 354 aaPredicted RBP16.99■□□□□ 0.31
CDH3-204ENST00000565453 OXCT2Q9BYC2 517 aaPredicted RBP16.99■□□□□ 0.31
CDH3-204ENST00000565453 FGFBP2Q9BYJ0 223 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 PANK2Q9BZ23 570 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 MRPL44Q9H9J2 332 aaKnown RBP16.99■□□□□ 0.31
CDH3-204ENST00000565453 TBC1D17Q9HA65 648 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 ARHGEF3Q9NR81 526 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 OLFML3Q9NRN5 406 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 GDE1Q9NZC3 331 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 TBC1D7Q9P0N9 293 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 C2CD2Q9Y426 696 aa16.99■□□□□ 0.31
CDH3-204ENST00000565453 TSC2P49815 1807 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 CACNA1HO95180 2353 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 MICAL2O94851 1124 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 OR4Q2P0C623 313 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 CPB1P15086 417 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 PAX3P23760 479 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 CCR2P41597 374 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 STK38Q15208 465 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 PHLDB3Q6NSJ2 640 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 DSTYKQ6XUX3 929 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 EFCAB13Q8IY85 973 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 TCEAL4Q96EI5 215 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 MCRS1Q96EZ8 462 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 SENP8Q96LD8 212 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 KXD1Q9BQD3 176 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 CORO1BQ9BR76 489 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 CRISPLD1Q9H336 500 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 CEP72Q9P209 647 aa16.98■□□□□ 0.31
CDH3-204ENST00000565453 OR6C75A6NL08 312 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 PROB1E7EW31 1015 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 SPTLC2O15270 562 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 PPP6R2O75170 966 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 MOSPD3O75425 235 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 EPHA5P54756 1037 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 TWF1Q12792 350 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 GPR17Q13304 367 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 MYBPC2Q14324 1141 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 POSTNQ15063 836 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 E2F4Q16254 413 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 OVOS1Q6IE37 1185 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 USP37Q86T82 979 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 HS6ST3Q8IZP7 471 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 DTWD2Q8NBA8 298 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 ZSWIM2Q8NEG5 633 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 POMGNT1Q8WZA1 660 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 ACCSQ96QU6 501 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 PLA2G2FQ9BZM2 168 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 TFIP11Q9UBB9 837 aaKnown RBP16.97■□□□□ 0.31
CDH3-204ENST00000565453 EXOC7Q9UPT5 735 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 YIPF1Q9Y548 306 aa16.97■□□□□ 0.31
CDH3-204ENST00000565453 ECI2O75521 394 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 GCNT3O95395 438 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 CYP11A1P05108 521 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 ODC1P11926 461 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 IDEP14735 1019 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 FCARP24071 287 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 WNT7BP56706 349 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 STARD6P59095 220 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 ALCAMQ13740 583 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 PDILTQ8N807 584 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 BORCS6Q96GS4 357 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 ZNF396Q96N95 335 aaPredicted RBP16.96■□□□□ 0.31
CDH3-204ENST00000565453 PGLYRP2Q96PD5 576 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 TMEM209Q96SK2 561 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 DNAJC25Q9H1X3 360 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 PANK4Q9NVE7 773 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 DLGAP2Q9P1A6 1054 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 PCDHB13Q9Y5F0 798 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 COL4A3Q01955 1670 aa16.96■□□□□ 0.31
CDH3-204ENST00000565453 MTMR11A4FU01 709 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 ZNF197O14709 1029 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 IL18RAPO95256 599 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 YEATS4O95619 227 aa16.95■□□□□ 0.3
CDH3-204ENST00000565453 GARTP22102 1010 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms