RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 JADE1Q6IE81 842 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 IQCEQ6IPM2 695 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 SLC39A4Q6P5W5 647 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 LTB4R2Q9NPC1 389 aa29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 AVENQ9NQS1 362 aaPredicted RBP29.41■■■□□ 2.3
SNRPA1-215ENST00000561187 OGTO15294 1046 aa29.4■■■□□ 2.3
SNRPA1-215ENST00000561187 FAM189A1O60320 539 aa29.4■■■□□ 2.3
SNRPA1-215ENST00000561187 CYP4A22Q5TCH4 519 aa29.4■■■□□ 2.3
SNRPA1-215ENST00000561187 USP37Q86T82 979 aa29.4■■■□□ 2.3
SNRPA1-215ENST00000561187 ZNF512Q96ME7 567 aaPredicted RBP29.4■■■□□ 2.3
SNRPA1-215ENST00000561187 ZSWIM3Q96MP5 696 aa29.4■■■□□ 2.3
SNRPA1-215ENST00000561187 DDX23Q9BUQ8 820 aaKnown RBP29.4■■■□□ 2.3
SNRPA1-215ENST00000561187 BCO2Q9BYV7 579 aa29.4■■■□□ 2.3
SNRPA1-215ENST00000561187 M0QZQ0 153 aa29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 TULP1O00294 542 aaPredicted RBP29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 VNN2O95498 520 aa29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 NFICP08651 508 aa29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 TARSP26639 723 aaKnown RBP29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 LONP1P36776 959 aaKnown RBP29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 ZNF131P52739 623 aa29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 ZBTB6Q15916 424 aa29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 ZC2HC1CQ53FD0 456 aaPredicted RBP29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 BRAPQ7Z569 592 aa29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 LARP4BQ92615 738 aaKnown RBP29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 IKZF4Q9H2S9 585 aa29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 CRISPLD1Q9H336 500 aa29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 ASAH2Q9NR71 780 aa29.39■■■□□ 2.3
SNRPA1-215ENST00000561187 ZNF197O14709 1029 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 PIGRP01833 764 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 USP49Q70CQ1 688 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 ELSPBP1Q96BH3 223 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 TMEM209Q96SK2 561 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 FIZ1Q96SL8 496 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 HINFPQ9BQA5 517 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 SLITRK6Q9H5Y7 841 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 BRD9Q9H8M2 597 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 ZFP14Q9HCL3 533 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 CLIC4Q9Y696 253 aa29.38■■■□□ 2.29
SNRPA1-215ENST00000561187 ANKRD63C9JTQ0 380 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 SLC26A4O43511 780 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 XPOTO43592 962 aaKnown RBP29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 MOSPD3O75425 235 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 BMP15O95972 392 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 LMNAP02545 664 aaKnown RBP29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 CYP3A5P20815 502 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 VIPR2P41587 438 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 ACOT2P49753 483 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 TEAD2Q15562 447 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 DYMQ7RTS9 669 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 MAML2Q8IZL2 1156 aaPredicted RBP29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 EPSTI1Q96J88 318 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 ASB16Q96NS5 453 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 ANK1P16157 1881 aa29.37■■■□□ 2.29
SNRPA1-215ENST00000561187 PATJQ8NI35 1801 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 A0A0B4J269 797 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 SOAT2O75908 522 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 AARSP49588 968 aaKnown RBP eCLIP29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 DUSP4Q13115 394 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 OVOS1Q6IE37 1185 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 MAP4K3Q8IVH8 894 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 TTC9BQ8N6N2 239 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 BEST2Q8NFU1 509 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 CPSF3Q9UKF6 684 aaKnown RBP29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 NDRG2Q9UN36 371 aaKnown RBP29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 SLC27A5Q9Y2P5 690 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 NCANO14594 1321 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 TSC2P49815 1807 aa29.36■■■□□ 2.29
SNRPA1-215ENST00000561187 SPTLC1O15269 473 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 LAMTOR5O43504 91 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 OAZ2O95190 189 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 CEBPZQ03701 1054 aaKnown RBP29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 TMEM132DQ14C87 1099 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 KYAT1Q16773 422 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 SPATA1Q5VX52 437 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 FAM173BQ6P4H8 233 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 ZC3H14Q6PJT7 736 aaKnown RBP29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 VITQ6UXI7 678 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 SFR1Q86XK3 245 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 GPIHBP1Q8IV16 184 aa29.35■■■□□ 2.29
SNRPA1-215ENST00000561187 GDI1P31150 447 aa29.34■■■□□ 2.29
SNRPA1-215ENST00000561187 ADALQ6DHV7 355 aa29.34■■■□□ 2.29
SNRPA1-215ENST00000561187 ATAD1Q8NBU5 361 aa29.34■■■□□ 2.29
SNRPA1-215ENST00000561187 SHKBP1Q8TBC3 707 aa29.34■■■□□ 2.29
SNRPA1-215ENST00000561187 ZSCAN18Q8TBC5 510 aaPredicted RBP29.34■■■□□ 2.29
SNRPA1-215ENST00000561187 SMARCD2Q92925 531 aa29.34■■■□□ 2.29
SNRPA1-215ENST00000561187 SENP8Q96LD8 212 aa29.34■■■□□ 2.29
SNRPA1-215ENST00000561187 DNAJC25Q9H1X3 360 aa29.34■■■□□ 2.29
SNRPA1-215ENST00000561187 FRYLO94915 3013 aa29.34■■■□□ 2.29
SNRPA1-215ENST00000561187 TICRRQ7Z2Z1 1910 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 DCHS1Q96JQ0 3298 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 A0A1W2PRU2 124 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 ODC1P11926 461 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 LILRA4P59901 499 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 GTF2BQ00403 316 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 CSTF1Q05048 431 aaKnown RBP29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 STXBP5Q5T5C0 1151 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 C9orf57Q5W0N0 161 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 KRI1Q8N9T8 703 aaKnown RBP29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 CLIC6Q96NY7 704 aa29.33■■■□□ 2.29
SNRPA1-215ENST00000561187 TRMT61BQ9BVS5 477 aaKnown RBP29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms