RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 SLC17A8Q8NDX2 589 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 FAM13CQ8NE31 585 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 EPS8L3Q8TE67 593 aaKnown RBP14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 RMDN2Q96LZ7 410 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 MAGEB18Q96M61 343 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 IWS1Q96ST2 819 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 CCDC113Q9H0I3 377 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 ZMYND8Q9ULU4 1186 aaPredicted RBP14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 TMCO1Q9UM00 188 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 FZD1Q9UP38 647 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 TRIM33Q9UPN9 1127 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 PHF24Q9UPV7 400 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 USP20Q9Y2K6 914 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 EMSYQ7Z589 1322 aa14.83□□□□□ -0.04
RABGGTA-220ENST00000560998 TMEM120BA0PK00 339 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 SMIM23A6NLE4 172 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 C19orf81C9J6K1 198 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 PYGBP11216 843 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 PLTPP55058 493 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 POLE2P56282 527 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 PPP3CAQ08209 521 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 TMEM132BQ14DG7 1078 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 FAM102BQ5T8I3 360 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 HHATQ5VTY9 493 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 ANO5Q75V66 913 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 PROCA1Q8NCQ7 364 aaPredicted RBP14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 FBXO25Q8TCJ0 367 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 PCMTD2Q9NV79 361 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 GRHL1Q9NZI5 618 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 PCDHA10Q9Y5I2 948 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 NCANO14594 1321 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 ARID2Q68CP9 1835 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 MAGEA13PA6NCF6 341 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 P4HA2O15460 535 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 MAFGO15525 162 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 MAP3K13O43283 966 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 DCTN3O75935 186 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 KCNA2P16389 499 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 CHRNA3P32297 505 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 POLGP54098 1239 aaPredicted RBP14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 YARSP54577 528 aaKnown RBP14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 KIF22Q14807 665 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 GSTA3Q16772 222 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 EPC2Q52LR7 807 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 ARHGEF18Q6ZSZ5 1173 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 TRMT1LQ7Z2T5 733 aaKnown RBP14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 LCA5Q86VQ0 697 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 ECHDC2Q86YB7 292 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 GLYCTKQ8IVS8 523 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 ZSWIM2Q8NEG5 633 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 TRPM4Q8TD43 1214 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 NSUN6Q8TEA1 469 aaKnown RBP14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 PTPRN2Q92932 1015 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 OPTNQ96CV9 577 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 TGS1Q96RS0 853 aaKnown RBP14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 ATXN10Q9UBB4 475 aa14.82□□□□□ -0.04
RABGGTA-220ENST00000560998 ATP2A1O14983 1001 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 PHF2O75151 1096 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 STBD1O95210 358 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 GALCP54803 685 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 MCCD1P59942 119 aaPredicted RBP14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 ARHGAP44Q17R89 818 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 RNF220Q5VTB9 566 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 DPY19L2Q6NUT2 758 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 CATSPERGQ6ZRH7 1159 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 VSIG1Q86XK7 387 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 TMEM161BQ8NDZ6 487 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 PLEKHO2Q8TD55 490 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 LZICQ8WZA0 190 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 NCSTNQ92542 709 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 ARHGEF2Q92974 986 aaKnown RBP14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 AZIN2Q96A70 460 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 KLRG1Q96E93 195 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 SEMA4AQ9H3S1 761 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 GOLPH3Q9H4A6 298 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 DOCK5Q9H7D0 1870 aa14.81□□□□□ -0.04
RABGGTA-220ENST00000560998 FOXN3O00409 490 aaPredicted RBP14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 ZNF862O60290 1169 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 RGS20O76081 388 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 GGPS1O95749 300 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 MGAT5Q09328 741 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 CETN1Q12798 172 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 STRN3Q13033 797 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 VSTM1Q6UX27 236 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 PPP1R21Q6ZMI0 780 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 ANKLE1Q8NAG6 615 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 GBP5Q96PP8 586 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 TLE6Q9H808 572 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 GABBR1Q9UBS5 961 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 PCYOX1Q9UHG3 505 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 TBX20Q9UMR3 447 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 EXOC7Q9UPT5 735 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 USH1CQ9Y6N9 552 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 SSC5DA1L4H1 1573 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 SIGLEC16A6NMB1 481 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 EIF4E1BA6NMX2 242 aaKnown RBP14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 PMM2O15305 246 aa14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 DDX3YO15523 660 aaKnown RBP14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 ZSCAN9O15535 394 aaPredicted RBP14.8□□□□□ -0.04
RABGGTA-220ENST00000560998 ADRB2P07550 413 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms