RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 TMEM253P0C7T8 217 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 PNMA6AP0CW24 399 aaPredicted RBP12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 COL6A1P12109 1028 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 LRPAP1P30533 357 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 ASPAP45381 313 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 ZNF132P52740 706 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 DSC3Q14574 896 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 WDR72Q3MJ13 1102 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 ZNF618Q5T7W0 954 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 SPOPLQ6IQ16 392 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 TMEM270Q6UE05 265 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 LRRC8DQ7L1W4 858 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 NOP9Q86U38 636 aaKnown RBP12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 RHOT2Q8IXI1 618 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 RPUSD2Q8IZ73 545 aaKnown RBP12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 LNX1Q8TBB1 728 aaPredicted RBP12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 U2AF1L4Q8WU68 220 aaKnown RBP12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 CTNNBL1Q8WYA6 563 aaPredicted RBP12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 APBB2Q92870 758 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 ZNF333Q96JL9 665 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 TOX2Q96NM4 488 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 NAPGQ99747 312 aaPredicted RBP12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 L2HGDHQ9H9P8 463 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 CISHQ9NSE2 258 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 SEPT11Q9NVA2 429 aaKnown RBP12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 AGAP1Q9UPQ3 857 aa12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 TRIP12Q14669 1992 aaPredicted RBP12.66□□□□□ -0.38
AC087878.1-201ENST00000560709 RIOK3O14730 519 aaKnown RBP12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 MED7O43513 233 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 RTN2O75298 545 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 SLU7O95391 586 aaKnown RBP12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 SGPL1O95470 568 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 LSM8O95777 96 aaKnown RBP12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 MYBL1P10243 752 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 HSPA8P11142 646 aaKnown RBP12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 AKAP5P24588 427 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 GNA15P30679 374 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 CD52P31358 61 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 CTCFP49711 727 aaPredicted RBP12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 INCA1Q0VD86 236 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 MTFR1Q15390 333 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 STILQ15468 1287 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 SV2CQ496J9 727 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 ANKRD33Q7Z3H0 272 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 SLC47A2Q86VL8 602 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 DNAJC5GQ8N7S2 189 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 ARID3AQ99856 593 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 APOL6Q9BWW8 343 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 ZNF518BQ9C0D4 1074 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 LACRTQ9GZZ8 138 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 TRPV6Q9H1D0 765 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 ISCUQ9H1K1 167 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 PDCL3Q9H2J4 239 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 AGO3Q9H9G7 860 aaKnown RBP12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 HES2Q9Y543 173 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 CEP83Q9Y592 693 aa12.65□□□□□ -0.38
AC087878.1-201ENST00000560709 NCANO14594 1321 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 UMODL1Q5DID0 1318 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 ANK1P16157 1881 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 ARHGEF37A1IGU5 675 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 DCDC2CA8MYV0 355 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 DYNC1I1O14576 645 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 INPPL1O15357 1258 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 EOMESO95936 686 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 THP07101 528 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 RPL9P32969 192 aaKnown RBP12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 TAF6P49848 677 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 NAP1L1P55209 391 aaKnown RBP12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 FMO1Q01740 532 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 TCEAL1Q15170 157 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 C9orf57Q5W0N0 161 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 TRAF7Q6Q0C0 670 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 DPH6Q7L8W6 267 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 UNC93AQ86WB7 457 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 SYCE1Q8N0S2 351 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 OLIG1Q8TAK6 271 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 RFFLQ8WZ73 363 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 DDX1Q92499 740 aaKnown RBP12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 ZMAT2Q96NC0 199 aaKnown RBP12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 PPP1R10Q96QC0 940 aaKnown RBP12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 RSAD1Q9HA92 442 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 RGS18Q9NS28 235 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 GDAP2Q9NXN4 497 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 NXF1Q9UBU9 619 aaKnown RBP12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 LCMT1Q9UIC8 334 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 JRKLQ9Y4A0 524 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 CITO14578 2027 aa12.64□□□□□ -0.39
AC087878.1-201ENST00000560709 UQCRHLA0A096LP55 91 aa12.63□□□□□ -0.39
AC087878.1-201ENST00000560709 MACROD2A1Z1Q3 448 aa12.63□□□□□ -0.39
AC087878.1-201ENST00000560709 PIRO00625 290 aa12.63□□□□□ -0.39
AC087878.1-201ENST00000560709 CILPO75339 1184 aa12.63□□□□□ -0.39
AC087878.1-201ENST00000560709 TFRCP02786 760 aaKnown RBP12.63□□□□□ -0.39
AC087878.1-201ENST00000560709 UQCRHP07919 91 aa12.63□□□□□ -0.39
AC087878.1-201ENST00000560709 HADHBP55084 474 aaKnown RBP12.63□□□□□ -0.39
AC087878.1-201ENST00000560709 GRIK3Q13003 919 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms