RNA–Protein interactions for RNA: ENST00000559343.1

RORA-210, Transcript of RAR related orphan receptor A, humanhuman

TSL 4

Gene RORA, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-210ENST00000559343 HCSTQ9UBK5 93 aa13.73□□□□□ -0.21
RORA-210ENST00000559343 CITO14578 2027 aa13.73□□□□□ -0.21
RORA-210ENST00000559343 CHD9Q3L8U1 2897 aa13.73□□□□□ -0.21
RORA-210ENST00000559343 SF3B1O75533 1304 aaKnown RBP eCLIP13.72□□□□□ -0.21
RORA-210ENST00000559343 ANO9A1A5B4 782 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 ARHGEF37A1IGU5 675 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 EPOPA6NHQ4 379 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 PODXLO00592 558 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 FSCN2O14926 492 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 B3GAT3O94766 335 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 C1RP00736 705 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 SOD2P04179 222 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 NFICP08651 508 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 TRIM49P0CI25 452 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 TRIM49CP0CI26 452 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 TRIM21P19474 475 aaKnown RBP13.72□□□□□ -0.21
RORA-210ENST00000559343 RFX1P22670 979 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 FECHP22830 423 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 PON1P27169 355 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 PNPLA4P41247 253 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 AARSP49588 968 aaKnown RBP eCLIP13.72□□□□□ -0.21
RORA-210ENST00000559343 MXI1P50539 228 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 ZBED6P86452 979 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 MYL7Q01449 175 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 SOX4Q06945 474 aaPredicted RBP13.72□□□□□ -0.21
RORA-210ENST00000559343 DUOXA2Q1HG44 320 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 CBWD6Q4V339 395 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 TIGD5Q53EQ6 642 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 CBWD3Q5JTY5 395 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 CBWD5Q5RIA9 395 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 PDXDC1Q6P996 788 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 SPRED2Q7Z698 418 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 TC2NQ8N9U0 490 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 CCDC112Q8NEF3 446 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 ZNF397Q8NF99 534 aaPredicted RBP13.72□□□□□ -0.21
RORA-210ENST00000559343 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 LMO3Q8TAP4 145 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 POF1BQ8WVV4 589 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 PPP2R3CQ969Q6 453 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 CCDC127Q96BQ5 260 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 FAM212AQ96EL1 285 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 ANKRD36BP1Q96IX9 119 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 GUCD1Q96NT3 240 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 CDX2Q99626 313 aaPredicted RBP13.72□□□□□ -0.21
RORA-210ENST00000559343 CGRRF1Q99675 332 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 MMRN2Q9H8L6 949 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 CERS4Q9HA82 394 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 PDE11AQ9HCR9 933 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 TLR9Q9NR96 1032 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 CEP72Q9P209 647 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 ITGA11Q9UKX5 1188 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 MTUS1Q9ULD2 1270 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 MYO6Q9UM54 1294 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 LUC7L2Q9Y383 392 aaKnown RBP13.72□□□□□ -0.21
RORA-210ENST00000559343 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
RORA-210ENST00000559343 CASTOR2A6NHX0 329 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 PIRO00625 290 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 SYN3O14994 580 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 GRM6O15303 877 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 NCK2O43639 380 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 MFAP3LO75121 409 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 TADA2AO75478 443 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 NOL4O94818 638 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 C4BPAP04003 597 aaKnown RBP13.71□□□□□ -0.21
RORA-210ENST00000559343 TMEM191BP0C7N4 346 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 CTSAP10619 480 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 HNRNPH3P31942 346 aaKnown RBP13.71□□□□□ -0.21
RORA-210ENST00000559343 CASP14P31944 242 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 CLCNKBP51801 687 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 CREMQ03060 361 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 CAMK1Q14012 370 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 ZACNQ401N2 412 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 FUT10Q6P4F1 479 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 SV2AQ7L0J3 742 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 TMEM173Q86WV6 379 aaPredicted RBP13.71□□□□□ -0.21
RORA-210ENST00000559343 EFCAB13Q8IY85 973 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 LRRC52Q8N7C0 313 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 OR8K1Q8NGG5 319 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 SYN2Q92777 582 aaPredicted RBP13.71□□□□□ -0.21
RORA-210ENST00000559343 C18orf25Q96B23 403 aaPredicted RBP13.71□□□□□ -0.21
RORA-210ENST00000559343 FAM81BQ96LP2 452 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 PCMTD1Q96MG8 357 aaPredicted RBP13.71□□□□□ -0.21
RORA-210ENST00000559343 DNAJC7Q99615 494 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 HERC2P3Q9BVR0 1158 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 ZBP1Q9H171 429 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 ALG13Q9NP73 1137 aaKnown RBP13.71□□□□□ -0.21
RORA-210ENST00000559343 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 DPP3Q9NY33 737 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 TUBGCP4Q9UGJ1 667 aa13.71□□□□□ -0.21
RORA-210ENST00000559343 PRG3Q9Y2Y8 225 aaPredicted RBP13.71□□□□□ -0.21
RORA-210ENST00000559343 NT5C1B-RDH14C9J2C7 533 aa13.7□□□□□ -0.22
RORA-210ENST00000559343 NRDCO43847 1150 aa13.7□□□□□ -0.22
RORA-210ENST00000559343 KIF4AO95239 1232 aa13.7□□□□□ -0.22
RORA-210ENST00000559343 STAU1O95793 577 aaKnown RBP13.7□□□□□ -0.22
RORA-210ENST00000559343 TNNC2P02585 160 aa13.7□□□□□ -0.22
RORA-210ENST00000559343 KRT9P35527 623 aa13.7□□□□□ -0.22
RORA-210ENST00000559343 PBX3P40426 434 aa13.7□□□□□ -0.22
RORA-210ENST00000559343 GCLMP48507 274 aa13.7□□□□□ -0.22
RORA-210ENST00000559343 RBP5P82980 135 aa13.7□□□□□ -0.22
RORA-210ENST00000559343 DSG1Q02413 1049 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms