RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 HOXB8P17481 243 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 ABCD1P33897 745 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 MCCD1P59942 119 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 NTHL1P78549 312 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 FAM160A1Q05DH4 1040 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 KCNB1Q14721 858 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 KYAT1Q16773 422 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 LRRTM3Q86VH5 581 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 OSTM1Q86WC4 334 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 CD302Q8IX05 232 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 GJD3Q8N144 294 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 SENP8Q96LD8 212 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 MED15Q96RN5 788 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 EMILIN2Q9BXX0 1053 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 MTMR12Q9C0I1 747 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 SMOC2Q9H3U7 446 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 INTS13Q9NVM9 706 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 CHMP5Q9NZZ3 219 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 PCDHB8Q9UN66 801 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
RABGGTA-207ENST00000558936 PTPRDP23468 1912 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 SYN3O14994 580 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 SP100P23497 879 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 MCM4P33991 863 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 CYP2J2P51589 502 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 CLDN10P78369 228 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 CYP24A1Q07973 514 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 SNRNP35Q16560 246 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 KIAA1841Q6NSI8 718 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 PPFIBP1Q86W92 1011 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 TTC9BQ8N6N2 239 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 KREMEN2Q8NCW0 462 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 BEST2Q8NFU1 509 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 CMASQ8NFW8 434 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 PYM1Q9BRP8 204 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 TMLHEQ9NVH6 421 aa13.68□□□□□ -0.22
RABGGTA-207ENST00000558936 COL4A3Q01955 1670 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 CCDC195A0A1B0GUA6 201 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 C2CD4DB7Z1M9 353 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 ZMYND10O75800 440 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 VNN1O95497 513 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 GLUD1P00367 558 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 ITGB3P05106 788 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 CYP11A1P05108 521 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 MYL1P05976 194 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 ADH1AP07327 375 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 POLR2BP30876 1174 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 PRCPP42785 496 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 PSMD2Q13200 908 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 WSCD1Q658N2 575 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 ISM2Q6H9L7 571 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 RNF19BQ6ZMZ0 732 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 CLEC17AQ6ZS10 378 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 SLC9A9Q8IVB4 645 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 ST13P5Q8NFI4 369 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 EEF2KMTQ96G04 330 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 TIGD1Q96MW7 591 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 TSPAN18Q96SJ8 248 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 PKMYT1Q99640 499 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 PHF7Q9BWX1 381 aaPredicted RBP13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 EXOC1Q9NV70 894 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 DZANK1Q9NVP4 752 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 HCFC1R1Q9NWW0 138 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 TRAF3IP3Q9Y228 551 aa13.67□□□□□ -0.22
RABGGTA-207ENST00000558936 GREB1Q4ZG55 1949 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 LRRIQ3A6PVS8 624 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 AKAP3O75969 853 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 IL18RAPO95256 599 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 LDHAP00338 332 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 C1RP00736 705 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 C4BPAP04003 597 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 SSTR3P32745 418 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 TFAMQ00059 246 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 ITIH3Q06033 890 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 ELAVL2Q12926 359 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 PSMD6Q15008 389 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 C15orf39Q6ZRI6 1047 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 ANKS3Q6ZW76 656 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 RNF135Q8IUD6 432 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 XXYLT1Q8NBI6 393 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 PARD3BQ8TEW8 1205 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 MYADMQ96S97 322 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 LPIN3Q9BQK8 851 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 XYLT2Q9H1B5 865 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 DNAJC25Q9H1X3 360 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 SFXN1Q9H9B4 322 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 MAN1B1Q9UKM7 699 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 L1RE1Q9UN81 338 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 AGAP1Q9UPQ3 857 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 NUB1Q9Y5A7 615 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 DENND4CQ5VZ89 1909 aa13.66□□□□□ -0.22
RABGGTA-207ENST00000558936 OBSL1O75147 1896 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 WDFY4Q6ZS81 3184 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 TRIM49BA6NDI0 452 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 ZNF233A6NK53 670 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 PI4K2BG5E9Z4 385 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 PDXKO00764 312 aa13.65□□□□□ -0.22
RABGGTA-207ENST00000558936 MOSPD3O75425 235 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms