RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 C9orf57Q5W0N0 161 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 CREBRFQ8IUR6 639 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 C1orf127Q8N9H9 656 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 C3orf58Q8NDZ4 430 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 SPPL3Q8TCT6 385 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 TMC2Q8TDI7 906 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 POF1BQ8WVV4 589 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 GZF1Q9H116 711 aaPredicted RBP13.21□□□□□ -0.3
RCCD1-209ENST00000557750 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 RALGAPA2Q2PPJ7 1873 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 ZNF318Q5VUA4 2279 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 PPEF2O14830 753 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 LINC01565O15544 149 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 RRP9O43818 475 aaKnown RBP13.2□□□□□ -0.3
RCCD1-209ENST00000557750 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.35e-6■■■■■ 120.6
RCCD1-209ENST00000557750 GNA14O95837 355 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 IGFBP6P24592 240 aaPredicted RBP13.2□□□□□ -0.3
RCCD1-209ENST00000557750 POLR2BP30876 1174 aaKnown RBP13.2□□□□□ -0.3
RCCD1-209ENST00000557750 CLCN1P35523 988 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 UBE3AQ05086 875 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 BIRC3Q13489 604 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 TCERG1LQ5VWI1 586 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 FUT10Q6P4F1 479 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 DDX53Q86TM3 631 aaKnown RBP13.2□□□□□ -0.3
RCCD1-209ENST00000557750 NAT10Q9H0A0 1025 aaKnown RBP13.2□□□□□ -0.3
RCCD1-209ENST00000557750 IGFLR1Q9H665 355 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 METTL14Q9HCE5 456 aaKnown RBP13.2□□□□□ -0.3
RCCD1-209ENST00000557750 MUTYHQ9UIF7 546 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 ITGA11Q9UKX5 1188 aa13.2□□□□□ -0.3
RCCD1-209ENST00000557750 ATG2AQ2TAZ0 1938 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 TMEM189-UBE2V1I3L0A0 370 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 IKBKBO14920 756 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 TRAPPC3O43617 180 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 PHACTR2O75167 634 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 TBX10O75333 385 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 CLSTN1O94985 981 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 CA8P35219 290 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 AP3M2P53677 418 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 CLDN10P78369 228 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 TRAPPC11Q7Z392 1133 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 FRMD5Q7Z6J6 570 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 VPS52Q8N1B4 723 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 MICAL1Q8TDZ2 1067 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 ZNF516Q92618 1163 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 BORCS6Q96GS4 357 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 GPR62Q9BZJ7 368 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 AGAP1Q9UPQ3 857 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 LZTS1Q9Y250 596 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 NFE2L3Q9Y4A8 694 aa13.19□□□□□ -0.3
RCCD1-209ENST00000557750 ANO9A1A5B4 782 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 I3L4J1 428 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 PIRO00625 290 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 DNAJB1P25685 340 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 BRCC3P46736 316 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 GCLMP48507 274 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 RBP5P82980 135 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 ENPEPQ07075 957 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 ELAVL2Q12926 359 aaKnown RBP13.18□□□□□ -0.3
RCCD1-209ENST00000557750 SMAD4Q13485 552 aaKnown RBP13.18□□□□□ -0.3
RCCD1-209ENST00000557750 CAMK1Q14012 370 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 HSP90AA4PQ58FG1 418 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 C1orf220Q5T0J3 134 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 FAM171A1Q5VUB5 890 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 TMC7Q7Z402 723 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 RNF135Q8IUD6 432 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 ENOX1Q8TC92 643 aaKnown RBP13.18□□□□□ -0.3
RCCD1-209ENST00000557750 CNOT6LQ96LI5 555 aaKnown RBP13.18□□□□□ -0.3
RCCD1-209ENST00000557750 ZNF560Q96MR9 790 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 TCF25Q9BQ70 676 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 FUCA2Q9BTY2 467 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 VN1R3Q9BXE9 311 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 THAP9Q9H5L6 903 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 ENTPD7Q9NQZ7 604 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 TLR9Q9NR96 1032 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 STK39Q9UEW8 545 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 CD207Q9UJ71 328 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 STX10O60499 249 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 SOD2P04179 222 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 PNPLA4P41247 253 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 TAF6P49848 677 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 LILRA4P59901 499 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 ERVFC1P60507 584 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 MYL5Q02045 173 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 PPP3CAQ08209 521 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 ADAM15Q13444 863 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 TRPC3Q13507 836 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 BMS1Q14692 1282 aaKnown RBP13.18□□□□□ -0.3
RCCD1-209ENST00000557750 TDRD10Q5VZ19 366 aaKnown RBP13.18□□□□□ -0.3
RCCD1-209ENST00000557750 KIAA1841Q6NSI8 718 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 CD300LGQ6UXG3 332 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 DSTYKQ6XUX3 929 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 SV2AQ7L0J3 742 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 TAS1R1Q7RTX1 841 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 CEP57Q86XR8 500 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 FAM114A1Q8IWE2 563 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 B3GALT6Q96L58 329 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 MAGEC2Q9UBF1 373 aaPredicted RBP13.18□□□□□ -0.3
RCCD1-209ENST00000557750 SIX4Q9UIU6 781 aa13.18□□□□□ -0.3
RCCD1-209ENST00000557750 TECTAO75443 2155 aa13.17□□□□□ -0.3
RCCD1-209ENST00000557750 CITO14578 2027 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms