RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 MDM1Q8TC05 714 aa4.18□□□□□ -1.74
FOXN3-217ENST00000557572 CEP95Q96GE4 821 aa4.18□□□□□ -1.74
FOXN3-217ENST00000557572 SH2D3AQ9BRG2 576 aa4.18□□□□□ -1.74
FOXN3-217ENST00000557572 QTRT1Q9BXR0 403 aaKnown RBP4.18□□□□□ -1.74
FOXN3-217ENST00000557572 TMX4Q9H1E5 349 aaPredicted RBP4.18□□□□□ -1.74
FOXN3-217ENST00000557572 TMX1Q9H3N1 280 aa4.18□□□□□ -1.74
FOXN3-217ENST00000557572 RNPEPQ9H4A4 650 aa4.18□□□□□ -1.74
FOXN3-217ENST00000557572 TXLNGQ9NUQ3 528 aa4.18□□□□□ -1.74
FOXN3-217ENST00000557572 SWAP70Q9UH65 585 aa4.18□□□□□ -1.74
FOXN3-217ENST00000557572 TMPRSS11EQ9UL52 423 aa4.18□□□□□ -1.74
FOXN3-217ENST00000557572 ATP8A1Q9Y2Q0 1164 aa4.18□□□□□ -1.74
FOXN3-217ENST00000557572 MTO1Q9Y2Z2 717 aaKnown RBP4.18□□□□□ -1.74
FOXN3-217ENST00000557572 SHTN1A0MZ66 631 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 ITGA10O75578 1167 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 ALDH1L1O75891 902 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 RAPGEF3O95398 923 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 F2P00734 622 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 ELFN1P0C7U0 828 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 POU3F2P20265 443 aaPredicted RBP4.17□□□□□ -1.74
FOXN3-217ENST00000557572 MCCP23508 829 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 CERS1P27544 350 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 VAV2P52735 878 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 LINC00205P59089 165 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 ZNF460Q14592 562 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 TTF1Q15361 905 aaPredicted RBP4.17□□□□□ -1.74
FOXN3-217ENST00000557572 SF3B3Q15393 1217 aaKnown RBP4.17□□□□□ -1.74
FOXN3-217ENST00000557572 C21orf62-AS1Q17RA5 79 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 SLC44A4Q53GD3 710 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 FAM47AQ5JRC9 791 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 WDR78Q5VTH9 848 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 SUMO4Q6EEV6 95 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 PCGF5Q86SE9 256 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 COLGALT2Q8IYK4 626 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 CASKIN2Q8WXE0 1202 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 TFAP2BQ92481 460 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 ZNF496Q96IT1 587 aaPredicted RBP4.17□□□□□ -1.74
FOXN3-217ENST00000557572 FEZ1Q99689 392 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.17□□□□□ -1.74
FOXN3-217ENST00000557572 GPRC5DQ9NZD1 345 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 PRSS50Q9UI38 385 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 KCNE5Q9UJ90 142 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 ST3GAL5Q9UNP4 418 aa4.17□□□□□ -1.74
FOXN3-217ENST00000557572 GAS8-AS1O95177 125 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 LATS1O95835 1130 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 SCGB1D2O95969 90 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 SNRPA1P09661 255 aaKnown RBP4.16□□□□□ -1.74
FOXN3-217ENST00000557572 JMJD7P0C870 316 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 CLRN1P58418 232 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 DSG1Q02413 1049 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 MCL1Q07820 350 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 MGAT5Q09328 741 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 MYBPC2Q14324 1141 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 PPP2R5AQ15172 486 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 RABEP1Q15276 862 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 FAM153CQ494X1 144 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 CCDC184Q52MB2 194 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 KIAA0895LQ68EN5 471 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 PPP4R4Q6NUP7 873 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 FOXR2Q6PJQ5 311 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 LYSMD2Q8IV50 215 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 ZNF610Q8N9Z0 462 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 NSMCE1Q8WV22 266 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 WBP1Q96G27 269 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 FUBP3Q96I24 572 aaKnown RBP eCLIP4.16□□□□□ -1.748e-7■□□□□ 10.2
FOXN3-217ENST00000557572 VPS16Q9H269 839 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 MSRAQ9UJ68 235 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 PADI4Q9UM07 663 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 USP18Q9UMW8 372 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 WASHC2CQ9Y4E1 1318 aa4.16□□□□□ -1.74
FOXN3-217ENST00000557572 CCDC78A2IDD5 438 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 PLIN1O60240 522 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 PHF2O75151 1096 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 TMEM127O75204 238 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 KRT18P05783 430 aaKnown RBP4.15□□□□□ -1.75
FOXN3-217ENST00000557572 MYL1P05976 194 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 POU5F1BQ06416 359 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 HDAC1Q13547 482 aaPredicted RBP4.15□□□□□ -1.75
FOXN3-217ENST00000557572 ZRSR2Q15696 482 aaKnown RBP4.15□□□□□ -1.75
FOXN3-217ENST00000557572 CFAP100Q494V2 611 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 ZNF66Q6ZN08 573 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 KRT73Q86Y46 540 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 DRC7Q8IY82 874 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 OR14C36Q8NHC7 312 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 TTC8Q8TAM2 541 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 SLC35B2Q8TB61 432 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 FBXL20Q96IG2 436 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 HAPLN3Q96S86 360 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 NAP1L4Q99733 375 aaKnown RBP4.15□□□□□ -1.75
FOXN3-217ENST00000557572 EVLQ9UI08 416 aaPredicted RBP4.15□□□□□ -1.75
FOXN3-217ENST00000557572 INTUQ9ULD6 942 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.15□□□□□ -1.75
FOXN3-217ENST00000557572 CD2APQ9Y5K6 639 aa4.15□□□□□ -1.75
FOXN3-217ENST00000557572 PRSS38A1L453 326 aa4.14□□□□□ -1.75
FOXN3-217ENST00000557572 MPPED1O15442 326 aa4.14□□□□□ -1.75
FOXN3-217ENST00000557572 TGM5O43548 720 aa4.14□□□□□ -1.75
FOXN3-217ENST00000557572 GAS7O60861 476 aa4.14□□□□□ -1.75
FOXN3-217ENST00000557572 FAM163BP0C2L3 166 aa4.14□□□□□ -1.75
FOXN3-217ENST00000557572 CYP2D6P10635 497 aa4.14□□□□□ -1.75
FOXN3-217ENST00000557572 EPHB1P54762 984 aa4.14□□□□□ -1.75
FOXN3-217ENST00000557572 INO80DQ53TQ3 878 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms