RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 RPS6KC1Q96S38 1066 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 NELL2Q99435 816 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 HEPHQ9BQS7 1158 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 MESP1Q9BRJ9 268 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 CPEB1Q9BZB8 566 aaKnown RBP2.14□□□□□ -2.07
HIF1A-212ENST00000557538 ZMAT3Q9HA38 289 aaKnown RBP2.14□□□□□ -2.07
HIF1A-212ENST00000557538 AFF4Q9UHB7 1163 aaKnown RBP2.14□□□□□ -2.07
HIF1A-212ENST00000557538 KCNE5Q9UJ90 142 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 PCDHA3Q9Y5H8 950 aa2.14□□□□□ -2.07
HIF1A-212ENST00000557538 PMM2O15305 246 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 ZSCAN22P10073 491 aaPredicted RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 TXNP10599 105 aaKnown RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 PEX2P28328 305 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 PTPN7P35236 360 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 CCT2P78371 535 aaKnown RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 BLOC1S1P78537 153 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 TAP1Q03518 808 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 HLXQ14774 488 aaPredicted RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 CCDC93Q567U6 631 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 ATXN7L2Q5T6C5 722 aaPredicted RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 FAM160B1Q5W0V3 765 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 KRT40Q6A162 431 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 SP5Q6BEB4 398 aaPredicted RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 EFCAB12Q6NXP0 572 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 CAMKK1Q8N5S9 505 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 OR2C3Q8N628 320 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 PPM1NQ8N819 430 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 OR5M3Q8NGP4 307 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 MDM1Q8TC05 714 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 MORC4Q8TE76 937 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 RPL10LQ96L21 214 aaKnown RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 PNKPQ96T60 521 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 PACSIN1Q9BY11 444 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 COL20A1Q9P218 1284 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 A0A1W2PPL8 197 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 GOLGA6L6A8MZA4 724 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 PRR5-ARHGAP8B1AHC4 643 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 TBX3O15119 743 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 GRM6O15303 877 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 PLA2G6O60733 806 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 DNAJB5O75953 348 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 IL18RAPO95256 599 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 CFIP05156 583 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 FPR1P21462 350 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 PPIFP30405 207 aaKnown RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 SLC5A2P31639 672 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 PIK3CBP42338 1070 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 FBLN7Q53RD9 439 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 HS1BP3Q53T59 392 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 TMED8Q6PL24 325 aaPredicted RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 MORC1Q86VD1 984 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 SYT12Q8IV01 421 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 UHRF1Q96T88 793 aaPredicted RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 STK33Q9BYT3 514 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 A1CFQ9NQ94 594 aaKnown RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 NECTIN3Q9NQS3 549 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 CNNM1Q9NRU3 951 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.13□□□□□ -2.07
HIF1A-212ENST00000557538 FBXO34Q9NWN3 711 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 CA14Q9ULX7 337 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 SH3BP1Q9Y3L3 701 aa2.13□□□□□ -2.07
HIF1A-212ENST00000557538 A0A1W2PRX2 142 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CFAP69A5D8W1 941 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 M0R3H8 397 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 A1BGP04217 495 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CD1AP06126 327 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 SERPINB3P29508 390 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 RRADP55042 308 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 BIRC2Q13490 618 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 KIAA0753Q2KHM9 967 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 SFRP4Q6FHJ7 346 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 KSR2Q6VAB6 950 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 TICAM2Q86XR7 235 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 FAM186BQ8IYM0 893 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 REPS2Q8NFH8 660 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 OR6B3Q8NGW1 331 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CCHCR1Q8TD31 782 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 MAML1Q92585 1016 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 VRK1Q99986 396 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CNPPD1Q9BV87 410 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 WDR12Q9GZL7 423 aaKnown RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 FAM83DQ9H4H8 585 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CTTNBP2NLQ9P2B4 639 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 DKK4Q9UBT3 224 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 ABCF2Q9UG63 623 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 OTOL1A6NHN0 477 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 LRRC14BA6NHZ5 514 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 TPD52L2O43399 206 aaKnown RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 ZNF623O75123 536 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 GJB1P08034 283 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 GNAI3P08754 354 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 NBPF7P0C2Y1 421 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 PIM1P11309 404 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 HOXA5P20719 270 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 COMTP21964 271 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 CNR2P34972 360 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 GNAI1P63096 354 aa2.12□□□□□ -2.07
HIF1A-212ENST00000557538 TOB2Q14106 344 aaPredicted RBP2.12□□□□□ -2.07
HIF1A-212ENST00000557538 TRIM71Q2Q1W2 868 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms