RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 CNNM4Q6P4Q7 775 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 DSTYKQ6XUX3 929 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 STXBP4Q6ZWJ1 553 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 USP37Q86T82 979 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 CCDC65Q8IXS2 484 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 ELMOD1Q8N336 334 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 IQUBQ8NA54 791 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 PRSS33Q8NF86 280 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 KCNG4Q8TDN1 519 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 POMGNT1Q8WZA1 660 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 SMOC2Q9H3U7 446 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 MAGEF1Q9HAY2 307 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 CYP4F11Q9HBI6 524 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 KBTBD4Q9NVX7 518 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 DNMT3BQ9UBC3 853 aaKnown RBP13.67□□□□□ -0.22
SNX6-207ENST00000556303 HSFX1Q9UBD0 423 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 DSEQ9UL01 958 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 WDR87Q6ZQQ6 2873 aa13.67□□□□□ -0.22
SNX6-207ENST00000556303 GCNT3O95395 438 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 PDGFBP01127 241 aaPredicted RBP13.66□□□□□ -0.22
SNX6-207ENST00000556303 CYP11A1P05108 521 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 RHOP08100 348 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 ZSCAN22P10073 491 aaPredicted RBP13.66□□□□□ -0.22
SNX6-207ENST00000556303 ODC1P11926 461 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 IDEP14735 1019 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 AOC1P19801 751 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 ADSSP30520 456 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 ACOT2P49753 483 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 SPAG1Q07617 926 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 TCF15Q12870 199 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 GPR17Q13304 367 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 PLD1Q13393 1074 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 C9orf57Q5W0N0 161 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 IQCEQ6IPM2 695 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 PHLDB3Q6NSJ2 640 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 RSAD2Q8WXG1 361 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 FAM212AQ96EL1 285 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 PYM1Q9BRP8 204 aaKnown RBP13.66□□□□□ -0.22
SNX6-207ENST00000556303 PANK4Q9NVE7 773 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 CFAP45Q9UL16 551 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 MRPS23Q9Y3D9 190 aaKnown RBP13.66□□□□□ -0.22
SNX6-207ENST00000556303 INSL5Q9Y5Q6 135 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 NUMBLQ9Y6R0 609 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 RIF1Q5UIP0 2472 aaKnown RBP13.66□□□□□ -0.22
SNX6-207ENST00000556303 NOTCH4Q99466 2003 aa13.66□□□□□ -0.22
SNX6-207ENST00000556303 ZFHX2Q9C0A1 2572 aaPredicted RBP13.66□□□□□ -0.22
SNX6-207ENST00000556303 KMT2EQ8IZD2 1858 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 A0A087X0B3 334 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 NPR3P17342 541 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 PNPLA4P41247 253 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 ARPP19P56211 112 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 NTHL1P78549 312 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 PFKPQ01813 784 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 ADCY1Q08828 1119 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 SMARCB1Q12824 385 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 E2F4Q16254 413 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 CYP4A22Q5TCH4 519 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 OVOS1Q6IE37 1185 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 CRELD2Q6UXH1 353 aaPredicted RBP13.65□□□□□ -0.22
SNX6-207ENST00000556303 SYCP3Q8IZU3 236 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 SIX5Q8N196 739 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 ITFG1Q8TB96 612 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.22
SNX6-207ENST00000556303 SENP8Q96LD8 212 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 ZNF512Q96ME7 567 aaPredicted RBP13.65□□□□□ -0.22
SNX6-207ENST00000556303 PANK2Q9BZ23 570 aa13.65□□□□□ -0.22
SNX6-207ENST00000556303 TFIP11Q9UBB9 837 aaKnown RBP13.65□□□□□ -0.22
SNX6-207ENST00000556303 PTPRZ1P23471 2315 aaPredicted RBP13.64□□□□□ -0.23
SNX6-207ENST00000556303 NARSO43776 548 aaKnown RBP13.64□□□□□ -0.23
SNX6-207ENST00000556303 ECI2O75521 394 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 SEC24AO95486 1093 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 F13A1P00488 732 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 NFICP08651 508 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 CPB1P15086 417 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 EPHA5P54756 1037 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 PRSS36Q5K4E3 855 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 ARMCX5Q6P1M9 558 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 PARM1Q6UWI2 310 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 METTL23Q86XA0 190 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 BRSK2Q8IWQ3 736 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 NPAS3Q8IXF0 933 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 PDILTQ8N807 584 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 TMEM105Q8N8V8 129 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 FGF14Q92915 247 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 SHDQ96IW2 340 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 TRIM9Q9C026 710 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 GPR88Q9GZN0 384 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 HCFC1R1Q9NWW0 138 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 DPP3Q9NY33 737 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 ASB3Q9Y575 518 aa13.64□□□□□ -0.23
SNX6-207ENST00000556303 EIF3DO15371 548 aaKnown RBP eCLIP13.63□□□□□ -0.23
SNX6-207ENST00000556303 EXTL3O43909 919 aa13.63□□□□□ -0.23
SNX6-207ENST00000556303 CFHP08603 1231 aa13.63□□□□□ -0.23
SNX6-207ENST00000556303 TAF6P49848 677 aa13.63□□□□□ -0.23
SNX6-207ENST00000556303 SNRPFP62306 86 aaKnown RBP13.63□□□□□ -0.23
SNX6-207ENST00000556303 KCNA1Q09470 495 aa13.63□□□□□ -0.23
SNX6-207ENST00000556303 CWF19L1Q69YN2 538 aaKnown RBP13.63□□□□□ -0.23
SNX6-207ENST00000556303 RNF19BQ6ZMZ0 732 aa13.63□□□□□ -0.23
SNX6-207ENST00000556303 PDZD4Q76G19 769 aaPredicted RBP13.63□□□□□ -0.23
SNX6-207ENST00000556303 FLCNQ8NFG4 579 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms