RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SSR1P43307 286 aaKnown RBP7.44□□□□□ -1.22
TDP1-213ENST00000555880 ITGA8P53708 1063 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 XRCC4Q13426 336 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 MTMR2Q13614 643 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 PSMD6Q15008 389 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 LLGL1Q15334 1064 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 CCDC38Q502W7 563 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 TNFAIP8L3Q5GJ75 292 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 CIAPIN1Q6FI81 312 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 GSTA5Q7RTV2 222 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 VSIG10LQ86VR7 867 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 FUKQ8N0W3 1084 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 GBP7Q8N8V2 638 aaPredicted RBP7.44□□□□□ -1.22
TDP1-213ENST00000555880 CCHCR1Q8TD31 782 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 NSUN6Q8TEA1 469 aaKnown RBP7.44□□□□□ -1.22
TDP1-213ENST00000555880 ATG4AQ8WYN0 398 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 BSNDQ8WZ55 320 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 VCPIP1Q96JH7 1222 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 ELAC2Q9BQ52 826 aaKnown RBP7.44□□□□□ -1.22
TDP1-213ENST00000555880 TACO1Q9BSH4 297 aaKnown RBP7.44□□□□□ -1.22
TDP1-213ENST00000555880 FOXP3Q9BZS1 431 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 DCLK3Q9C098 648 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 POLR3FQ9H1D9 316 aaPredicted RBP7.44□□□□□ -1.22
TDP1-213ENST00000555880 RPAP3Q9H6T3 665 aaPredicted RBP7.44□□□□□ -1.22
TDP1-213ENST00000555880 KCNK9Q9NPC2 374 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 CHST7Q9NS84 486 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 HAUS2Q9NVX0 235 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 NKIRAS1Q9NYS0 192 aa7.44□□□□□ -1.22
TDP1-213ENST00000555880 TMEM120BA0PK00 339 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 CFAP73A6NFT4 308 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 VWA5AO00534 786 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 WNT10BO00744 389 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 NDC80O14777 642 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 CDH16O75309 829 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 TCEA3O75764 348 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 SUN1O94901 812 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 HLA-DRAP01903 254 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 RALAP11233 206 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 TBXAS1P24557 533 aaPredicted RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 SLC8A1P32418 973 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 POLGP54098 1239 aaPredicted RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 PRKCEQ02156 737 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 BAATQ14032 418 aaPredicted RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 TRIP13Q15645 432 aaPredicted RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 CCNG2Q16589 344 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 KYNUQ16719 465 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 GNPTABQ3T906 1256 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 ZFYVE27Q5T4F4 411 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 SLFN12LQ6IEE8 588 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 SWSAP1Q6NVH7 229 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 MIS18BP1Q6P0N0 1132 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 RHBDF2Q6PJF5 856 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 ARHGEF18Q6ZSZ5 1173 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 MON1BQ7L1V2 547 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 TRPM8Q7Z2W7 1104 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 EXOC3L1Q86VI1 746 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 KATNAL2Q8IYT4 538 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 MGARPQ8TDB4 240 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 KCNV2Q8TDN2 545 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 IMPG2Q9BZV3 1241 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 YY1AP1Q9H869 796 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 MYOZ2Q9NPC6 264 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 CYP26B1Q9NR63 512 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 ADAM22Q9P0K1 906 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 ARHGAP28Q9P2N2 729 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 SLC9A2Q9UBY0 812 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 TSR3Q9UJK0 312 aaKnown RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 AGO2Q9UKV8 859 aaKnown RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 USP15Q9Y4E8 981 aaPredicted RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 PCDHB4Q9Y5E5 795 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 FER1L6Q2WGJ9 1857 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 NFASCO94856 1347 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 MYPNQ86TC9 1320 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 ADGRA3Q8IWK6 1321 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 DOCK5Q9H7D0 1870 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 TCP11X1B4DZS4 312 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 ZNF862O60290 1169 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 STAM2O75886 525 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 LDHAP00338 332 aaKnown RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 CYP1A1P04798 512 aaPredicted RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 EZRP15311 586 aaKnown RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 GNA15P30679 374 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 STX2P32856 288 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 CHKAP35790 457 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 VPS41P49754 854 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 SOX10P56693 466 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 CLDN10P78369 228 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 SP4Q02446 784 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 CUL2Q13617 745 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 STAT4Q14765 748 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 EMC2Q15006 297 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 ZNF568Q3ZCX4 644 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 ZACNQ401N2 412 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 XKR3Q5GH77 459 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 UBAP2Q5T6F2 1119 aaKnown RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 IZUMO3Q5VZ72 239 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 SNRNP48Q6IEG0 339 aaKnown RBP7.43□□□□□ -1.22
TDP1-213ENST00000555880 PPP1R21Q6ZMI0 780 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 C15orf39Q6ZRI6 1047 aa7.43□□□□□ -1.22
TDP1-213ENST00000555880 SAMD7Q7Z3H4 446 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms