RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	RIN2	Q8WYP3	895 aa	Predicted RBP	6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	IL17RA	Q96F46	866 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	PUS7L	Q9H0K6	701 aa	Known RBP	6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	NMRK2	Q9NPI5	230 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	TRHDE	Q9UKU6	1024 aa		6.65	□□□□□ -1.34
PSMC6-208	ENST00000554956	KIF7	Q2M1P5	1343 aa		6.65	□□□□□ -1.35
PSMC6-208	ENST00000554956	USP42	Q9H9J4	1324 aa	Known RBP	6.65	□□□□□ -1.35
PSMC6-208	ENST00000554956	CIC	Q96RK0	1608 aa	Predicted RBP	6.65	□□□□□ -1.35
PSMC6-208	ENST00000554956	CEP350	Q5VT06	3117 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	POLRMT	O00411	1230 aa	Known RBP	6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	RNMT	O43148	476 aa	Known RBP	6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	AMH	P03971	560 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	C1S	P09871	688 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	CYP19A1	P11511	503 aa	Predicted RBP	6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	MTHFD2	P13995	350 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	GYPE	P15421	78 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	TM4SF1	P30408	202 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	GZMK	P49863	264 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	RABGGTB	P53611	331 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	ANAPC15	P60006	121 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	DGCR2	P98153	550 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	MRPL49	Q13405	166 aa	Known RBP	6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	MTHFSD	Q2M296	383 aa	Known RBP	6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	ABCB5	Q2M3G0	1257 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	C19orf54	Q5BKX5	351 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	C1orf141	Q5JVX7	400 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	MFSD5	Q6N075	450 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	XYLT1	Q86Y38	959 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	C1orf210	Q8IVY1	113 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	REPS2	Q8NFH8	660 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	FBXO18	Q8NFZ0	1043 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	ZNF480	Q8WV37	535 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	ATXN2L	Q8WWM7	1075 aa	Known RBP	6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	MTMR8	Q96EF0	704 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	SCOC	Q9UIL1	159 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	KNSTRN	Q9Y448	316 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	PLEKHG2	Q9H7P9	1386 aa		6.64	□□□□□ -1.35
PSMC6-208	ENST00000554956	KRTAP23-1	A1A580	65 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	KLRG2	A4D1S0	409 aa	Predicted RBP	6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	AKR1B10	O60218	316 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	GNAT2	P19087	354 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	HK1	P19367	917 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	SOS1	Q07889	1333 aa	Predicted RBP	6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	PPP3CA	Q08209	521 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	ITK	Q08881	620 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	MST1L	Q2TV78	715 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	INAVA	Q3KP66	663 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	MBNL2	Q5VZF2	373 aa	Known RBP	6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	RPTOR	Q8N122	1335 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	DNAJC5G	Q8N7S2	189 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	MDGA1	Q8NFP4	955 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	ST8SIA2	Q92186	375 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	MENT	Q9BUN1	341 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	ZNF747	Q9BV97	191 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	LSM14B	Q9BX40	385 aa	Known RBP	6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	GPR87	Q9BY21	358 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	CPEB1	Q9BZB8	566 aa	Known RBP	6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	VPS11	Q9H270	941 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	KIAA1551	Q9HCM1	1747 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	TYW1	Q9NV66	732 aa	Known RBP	6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	GPRC5D	Q9NZD1	345 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	ZBTB1	Q9Y2K1	713 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	PCDHGA2	Q9Y5H1	932 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	GPR45	Q9Y5Y3	372 aa		6.63	□□□□□ -1.35
PSMC6-208	ENST00000554956	WNT10B	O00744	389 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	AGXT	P21549	392 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	MAN2A2	P49641	1150 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	CNGB1	Q14028	1251 aa	Predicted RBP	6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	CLUL1	Q15846	466 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	MUM1L1	Q5H9M0	696 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	PRAMEF14	Q5SWL7	426 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	CC2D1B	Q5T0F9	858 aa	Known RBP	6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	SYDE2	Q5VT97	1194 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	PGM2L1	Q6PCE3	622 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956		Q6ZVL8	140 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	AMOTL1	Q8IY63	956 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	GSPT2	Q8IYD1	628 aa	Known RBP	6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	GPR156	Q8NFN8	814 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	IL17RE	Q8NFR9	667 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	FATE1	Q969F0	183 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	CEP95	Q96GE4	821 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	CDC5L	Q99459	802 aa	Known RBP	6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	CPPED1	Q9BRF8	314 aa	Predicted RBP	6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	GREM2	Q9H772	168 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	TRPS1	Q9UHF7	1281 aa		6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	MYH14	Q7Z406	1995 aa	Known RBP	6.62	□□□□□ -1.35
PSMC6-208	ENST00000554956	KCP	Q6ZWJ8	1503 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	KCNQ3	O43525	872 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	MFAP3L	O75121	409 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	TOMM70	O94826	608 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	IPO13	O94829	963 aa	Known RBP	6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	MYBL2	P10244	700 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	SLC5A3	P53794	718 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	PTTG1IP	P53801	180 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	APBA1	Q02410	837 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	MALL	Q13021	153 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	ANKS6	Q68DC2	871 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	TMPRSS6	Q8IU80	811 aa		6.61	□□□□□ -1.35
PSMC6-208	ENST00000554956	C1orf162	Q8NEQ5	155 aa	Predicted RBP	6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms