RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 INPP5FQ9Y2H2 1132 aa17.58■□□□□ 0.41
PCNX1-209ENST00000554879 FAM133BQ5BKY9 247 aaKnown RBP17.58■□□□□ 0.41
PCNX1-209ENST00000554879 EEF1DP3Q658K8 133 aa17.58■□□□□ 0.41
PCNX1-209ENST00000554879 SPATA4Q8NEY3 305 aa17.58■□□□□ 0.41
PCNX1-209ENST00000554879 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.58■□□□□ 0.41
PCNX1-209ENST00000554879 UBLCP1Q8WVY7 318 aaPredicted RBP17.58■□□□□ 0.41
PCNX1-209ENST00000554879 GOLGA8KD6RF30 607 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 EIF3HO15372 352 aaKnown RBP eCLIP17.58■□□□□ 0.49e-8■□□□□ 9.3
PCNX1-209ENST00000554879 RTN2O75298 545 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 STAG3L1P0CL83 205 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 CYP11B1P15538 503 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 POLR2BP30876 1174 aaKnown RBP17.58■□□□□ 0.4
PCNX1-209ENST00000554879 SEMA4DQ92854 862 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 DDX47Q9H0S4 455 aaKnown RBP17.58■□□□□ 0.4
PCNX1-209ENST00000554879 CUL2Q13617 745 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 TMEM132DQ14C87 1099 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 GPAT2Q6NUI2 795 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 PLPPR4Q7Z2D5 763 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 OR5B17Q8NGF7 314 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 MAML3Q96JK9 1138 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 TAS2R14Q9NYV8 317 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 ARHGAP28Q9P2N2 729 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 AJAP1Q9UKB5 411 aaPredicted RBP17.58■□□□□ 0.4
PCNX1-209ENST00000554879 SNX9Q9Y5X1 595 aa17.58■□□□□ 0.4
PCNX1-209ENST00000554879 DIAPH2O60879 1101 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 IRF2BP2Q7Z5L9 587 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 SPATS2Q86XZ4 545 aaKnown RBP17.57■□□□□ 0.4
PCNX1-209ENST00000554879 ARFGAP2Q8N6H7 521 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 RAET1EQ8TD07 263 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 DMAC2Q9NW81 257 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 CCDC160A6NGH7 325 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 RARBP10826 455 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 ATP4AP20648 1035 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 CPT1AP50416 773 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 SLC8A3P57103 927 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 USP4Q13107 963 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 MAP2K5Q13163 448 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 TAF11Q15544 211 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 SGSM1Q2NKQ1 1148 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 HGSNATQ68CP4 663 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 B3GNT9Q6UX72 402 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 TAB3Q8N5C8 712 aaPredicted RBP17.57■□□□□ 0.4
PCNX1-209ENST00000554879 TMEM35BQ8NCS4 154 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 CGRRF1Q99675 332 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 KCND1Q9NSA2 647 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 CHCHD3Q9NX63 227 aaKnown RBP17.57■□□□□ 0.4
PCNX1-209ENST00000554879 PCDHB2Q9Y5E7 798 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 LTBP1Q14766 1721 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 SYNJ2BP-COX16A0A087WUM0 186 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 EME2A4GXA9 379 aaPredicted RBP17.57■□□□□ 0.4
PCNX1-209ENST00000554879 ACKR2O00590 384 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 UPP2O95045 317 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 ZBTB48P10074 688 aaPredicted RBP17.57■□□□□ 0.4
PCNX1-209ENST00000554879 FCGRTP55899 365 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 CCDC13Q8IYE1 715 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.57■□□□□ 0.4
PCNX1-209ENST00000554879 MED10Q9BTT4 135 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 HEMGNQ9BXL5 484 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 COX16Q9P0S2 106 aa17.57■□□□□ 0.4
PCNX1-209ENST00000554879 PGK1P00558 417 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 ADCY2Q08462 1091 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 IQSEC1Q6DN90 963 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 PBKQ96KB5 322 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 GTF2H1P32780 548 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 IFRD2Q12894 506 aaPredicted RBP17.56■□□□□ 0.4
PCNX1-209ENST00000554879 CALCOCO2Q13137 446 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 PDCD2Q16342 344 aaPredicted RBP17.56■□□□□ 0.4
PCNX1-209ENST00000554879 HHATQ5VTY9 493 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 ABTB1Q969K4 478 aaPredicted RBP17.56■□□□□ 0.4
PCNX1-209ENST00000554879 RRN3P2A6NIE6 340 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 SLC15A5A6NIM6 579 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 IFNB1P01574 187 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 HNRNPH3P31942 346 aaKnown RBP17.56■□□□□ 0.4
PCNX1-209ENST00000554879 OR6B2Q6IFH4 312 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 CYP4F22Q6NT55 531 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 ILDR2Q71H61 639 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 RNF168Q8IYW5 571 aaPredicted RBP17.56■□□□□ 0.4
PCNX1-209ENST00000554879 B4GALNT2Q8NHY0 566 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 LRRC1Q9BTT6 524 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 TRPA1O75762 1119 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 RAP1GAPP47736 663 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 PAK2Q13177 524 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 NIFKQ9BYG3 293 aaKnown RBP17.56■□□□□ 0.4
PCNX1-209ENST00000554879 SNX25Q9H3E2 840 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 MRPL47Q9HD33 250 aaKnown RBP17.56■□□□□ 0.4
PCNX1-209ENST00000554879 POLR2AP24928 1970 aaKnown RBP17.56■□□□□ 0.4
PCNX1-209ENST00000554879 DLEC1Q9Y238 1755 aa17.56■□□□□ 0.4
PCNX1-209ENST00000554879 CNMDO75829 334 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 SMPD1P17405 629 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 PSMD6Q15008 389 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 CCL14Q16627 93 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 CYB5D1Q6P9G0 228 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 ZPBP2Q6X784 338 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 NOP9Q86U38 636 aaKnown RBP17.55■□□□□ 0.4
PCNX1-209ENST00000554879 KIAA0319LQ8IZA0 1049 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 TTC16Q8NEE8 873 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 FIZ1Q96SL8 496 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 HES2Q9Y543 173 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 RASIP1Q5U651 963 aa17.55■□□□□ 0.4
PCNX1-209ENST00000554879 CEP128Q6ZU80 1094 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms