RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 TISP43B9A030 160 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 ANHXE9PGG2 379 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 KIAA0391O15091 583 aaKnown RBP9.45□□□□□ -0.9
ACTN1-213ENST00000554508 TYMPP19971 482 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 ME1P48163 572 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 NUBP1P53384 320 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 ARPP19P56211 112 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 LILRA4P59901 499 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 NUCB2P80303 420 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 KCNA1Q09470 495 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 PABPC1LQ4VXU2 614 aaKnown RBP9.45□□□□□ -0.9
ACTN1-213ENST00000554508 C9orf57Q5W0N0 161 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 RESP18Q5W5W9 173 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 GET4Q7L5D6 327 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-213ENST00000554508 DHX58Q96C10 678 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 IPO9Q96P70 1041 aaKnown RBP9.45□□□□□ -0.9
ACTN1-213ENST00000554508 C7orf25Q9BPX7 421 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 TRIM9Q9C026 710 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 CYP4F11Q9HBI6 524 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 AVENQ9NQS1 362 aaPredicted RBP9.45□□□□□ -0.9
ACTN1-213ENST00000554508 DPP3Q9NY33 737 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 CDH7Q9ULB5 785 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 PCDHA7Q9UN72 937 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 POLIQ9UNA4 740 aa9.45□□□□□ -0.9
ACTN1-213ENST00000554508 OR6C75A6NL08 312 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 EIF3DO15371 548 aaKnown RBP eCLIP9.44□□□□□ -0.9
ACTN1-213ENST00000554508 POLR2DO15514 142 aaKnown RBP9.44□□□□□ -0.9
ACTN1-213ENST00000554508 EXTL3O43909 919 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 PRPF6O94906 941 aaKnown RBP9.44□□□□□ -0.9
ACTN1-213ENST00000554508 CYP11A1P05108 521 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 NFICP08651 508 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 ODC1P11926 461 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 CPB1P15086 417 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 AVPR2P30518 371 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 TAF6P49848 677 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 GUCY2FP51841 1108 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 CASP5P51878 434 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 SNRPFP62306 86 aaKnown RBP9.44□□□□□ -0.9
ACTN1-213ENST00000554508 ASIC1P78348 528 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 DNM1Q05193 864 aaKnown RBP9.44□□□□□ -0.9
ACTN1-213ENST00000554508 ADCY1Q08828 1119 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 GPR17Q13304 367 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 MYBPC2Q14324 1141 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 OVOS1Q6IE37 1185 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 MTSS1LQ765P7 747 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 BRSK2Q8IWQ3 736 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 ELMOD1Q8N336 334 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 SLC44A3Q8N4M1 653 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 ZNF507Q8TCN5 953 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 CACTINQ8WUQ7 758 aaKnown RBP9.44□□□□□ -0.9
ACTN1-213ENST00000554508 SENP8Q96LD8 212 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 FAM213AQ9BRX8 229 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 SMOC2Q9H3U7 446 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 DNMT3BQ9UBC3 853 aaKnown RBP9.44□□□□□ -0.9
ACTN1-213ENST00000554508 WNT16Q9UBV4 365 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 DSEQ9UL01 958 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 ZDHHC9Q9Y397 364 aa9.44□□□□□ -0.9
ACTN1-213ENST00000554508 TIMM13Q9Y5L4 95 aaPredicted RBP9.44□□□□□ -0.9
ACTN1-213ENST00000554508 TSC2P49815 1807 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 UBE4BO95155 1302 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 ZNF197O14709 1029 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 PPEF2O14830 753 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 MICAL2O94851 1124 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 SEC24AO95486 1093 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 PDGFBP01127 241 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-213ENST00000554508 SRFP11831 508 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 PNPLA4P41247 253 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 CLCN5P51795 746 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 NTHL1P78549 312 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 PLD1Q13393 1074 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 HTR4Q13639 388 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 SURF1Q15526 300 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 SV2CQ496J9 727 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 FAM26FQ5R3K3 315 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 IQCEQ6IPM2 695 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 ARMCX5Q6P1M9 558 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 RNF19BQ6ZMZ0 732 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 UNC13DQ70J99 1090 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 METTL23Q86XA0 190 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 EFCAB13Q8IY85 973 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 CEP57L1Q8IYX8 460 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 THEM5Q8N1Q8 247 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 GPD1LQ8N335 351 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 TMEM130Q8N3G9 435 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 ITFG1Q8TB96 612 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 RSAD2Q8WXG1 361 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 FGF13Q92913 245 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 SAAL1Q96ER3 474 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 ZNF512Q96ME7 567 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-213ENST00000554508 IRF2BPLQ9H1B7 796 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 IKZF4Q9H2S9 585 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 MFSD1Q9H3U5 465 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 KIAA1586Q9HCI6 787 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 HCFC1R1Q9NWW0 138 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 RBAKQ9NYW8 714 aaPredicted RBP9.43□□□□□ -0.9
ACTN1-213ENST00000554508 GDE1Q9NZC3 331 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 HSFX1Q9UBD0 423 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 FBXL21Q9UKT6 434 aa9.43□□□□□ -0.9
ACTN1-213ENST00000554508 MRPS23Q9Y3D9 190 aaKnown RBP9.43□□□□□ -0.9
ACTN1-213ENST00000554508 ATP6V1DQ9Y5K8 247 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms