RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CPA4Q9UI42 421 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 PCDHA6Q9UN73 950 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 CDYLQ9Y232 598 aa6.41□□□□□ -1.38
SCFD1-211ENST00000554437 A0A088AWK7 358 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 CCDC78A2IDD5 438 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 ZNF785A8K8V0 405 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 NPIPB8E9PQR5 432 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 MARCH6O60337 910 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 ERN1O75460 977 aaKnown RBP6.4□□□□□ -1.38
SCFD1-211ENST00000554437 CFIP05156 583 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 ELANEP08246 267 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 RAB1AP62820 205 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 OCA2Q04671 838 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 SPDYE7PQ495Y7 208 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 KHDC1LQ5JSQ8 128 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 NPNTQ6UXI9 565 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 CPEB3Q8NE35 698 aaKnown RBP6.4□□□□□ -1.38
SCFD1-211ENST00000554437 B3GNT5Q9BYG0 378 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 FAM204AQ9H8W3 233 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 RLIMQ9NVW2 624 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 OBP2AQ9NY56 170 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 GPRC5BQ9NZH0 403 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 RNF181Q9P0P0 153 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 DDX20Q9UHI6 824 aaKnown RBP6.4□□□□□ -1.38
SCFD1-211ENST00000554437 ZDHHC8Q9ULC8 765 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 FZD1Q9UP38 647 aa6.4□□□□□ -1.38
SCFD1-211ENST00000554437 MTO1Q9Y2Z2 717 aaKnown RBP6.4□□□□□ -1.38
SCFD1-211ENST00000554437 PRSS29PA6NIE9 313 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 PPFIA4O75335 1185 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 MATN4O95460 622 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 RARBP10826 455 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 ZFP36P26651 326 aaKnown RBP6.39□□□□□ -1.39
SCFD1-211ENST00000554437 RESTQ13127 1097 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 KIF22Q14807 665 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 GRM3Q14832 879 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 LLGL1Q15334 1064 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 BEAN1Q3B7T3 259 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 ANO6Q4KMQ2 910 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 FNDC7Q5VTL7 733 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-211ENST00000554437 LRRC55Q6ZSA7 311 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 TMEM132CQ8N3T6 1108 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 ZNF483Q8TF39 744 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-211ENST00000554437 SCAMP4Q969E2 229 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 MYEOVQ96EZ4 313 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 TMEM60Q9H2L4 133 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 PRDM11Q9NQV5 511 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 CNNM1Q9NRU3 951 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 HSFX1Q9UBD0 423 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 NOX1Q9Y5S8 564 aa6.39□□□□□ -1.39
SCFD1-211ENST00000554437 FRMPD2Q68DX3 1309 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-211ENST00000554437 CAPN8A6NHC0 703 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 ZNF202O95125 648 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 GNAI2P04899 355 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 DDX6P26196 483 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCFD1-211ENST00000554437 AGFG1P52594 562 aaKnown RBP6.38□□□□□ -1.39
SCFD1-211ENST00000554437 ZNF135P52742 658 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-211ENST00000554437 EXOSC9Q06265 439 aaKnown RBP6.38□□□□□ -1.39
SCFD1-211ENST00000554437 ZNF844Q08AG5 666 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 B3GNTL1Q67FW5 361 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-211ENST00000554437 PPP4R4Q6NUP7 873 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 CRIP3Q6Q6R5 217 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 CELF5Q8N6W0 485 aaKnown RBP6.38□□□□□ -1.39
SCFD1-211ENST00000554437 PDPRQ8NCN5 879 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 LENG9Q96B70 501 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 RNF31Q96EP0 1072 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 NT5C1BQ96P26 610 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 MED15Q96RN5 788 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 MMRN2Q9H8L6 949 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 RSAD1Q9HA92 442 aa6.38□□□□□ -1.39
SCFD1-211ENST00000554437 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-211ENST00000554437 UNC119BA6NIH7 251 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 TMEM200CA6NKL6 621 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 FAM227AF5H4B4 570 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 NARSO43776 548 aaKnown RBP6.37□□□□□ -1.39
SCFD1-211ENST00000554437 LPXNO60711 386 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 ABHD16AO95870 558 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 C6P13671 934 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 HDCP19113 662 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 MAKP20794 623 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 BMPR1AP36894 532 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 KCNJ5P48544 419 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 SOX8P57073 446 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 CXADRP78310 365 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 GPSM2P81274 684 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 GBX1Q14549 363 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 IGFL4Q6B9Z1 124 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 KCNV1Q6PIU1 500 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 CFAP52Q8N1V2 620 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 FAM43AQ8N2R8 423 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 PCSK9Q8NBP7 692 aaKnown RBP6.37□□□□□ -1.39
SCFD1-211ENST00000554437 NSUN7Q8NE18 718 aaKnown RBP6.37□□□□□ -1.39
SCFD1-211ENST00000554437 PROKR1Q8TCW9 393 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 C8orf48Q96LL4 319 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 ALOXE3Q9BYJ1 711 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 GPR35Q9HC97 309 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 KCNE5Q9UJ90 142 aa6.37□□□□□ -1.39
SCFD1-211ENST00000554437 CENPVL1A0A0U1RR11 272 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 A0A1W2PPL8 197 aa6.36□□□□□ -1.39
SCFD1-211ENST00000554437 MARCH11A6NNE9 402 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms