RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ANKRD63C9JTQ0 380 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 M0QZQ0 153 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 ABLIM3O94929 683 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 IDEP14735 1019 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 MCM4P33991 863 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 AMPD3Q01432 767 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 ROR1Q01973 937 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 AXDND1Q5T1B0 1012 aaPredicted RBP11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 SPATA1Q5VX52 437 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 TPGS2Q68CL5 300 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 ZNF280DQ6N043 979 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 RSPO2Q6UXX9 243 aaPredicted RBP11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 NT5DC4Q86YG4 428 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 CCDC65Q8IXS2 484 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 PDILTQ8N807 584 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 IQUBQ8NA54 791 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 BEST2Q8NFU1 509 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 ZNF461Q8TAF7 563 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 SLC7A14Q8TBB6 771 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 POMGNT1Q8WZA1 660 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 NXPE3Q969Y0 559 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 PBXIP1Q96AQ6 731 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 PANK4Q9NVE7 773 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
PTCD2P1-201ENST00000554393 ARHGEF37A1IGU5 675 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 WDR27A2RRH5 827 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 N4BP1O75113 896 aaKnown RBP11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 OAZ2O95190 189 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 GCNT3O95395 438 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 ASGR2P07307 311 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 MYBP10242 640 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 GARTP22102 1010 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 ADSSP30520 456 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 GBP2P32456 591 aaPredicted RBP11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 ACOT2P49753 483 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 SPAG1Q07617 926 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 TDGQ13569 410 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 TMEM132DQ14C87 1099 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 LCE2DQ5TA82 110 aaPredicted RBP11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 JADE1Q6IE81 842 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 SHC4Q6S5L8 630 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 STXBP4Q6ZWJ1 553 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 SUGP1Q8IWZ8 645 aaKnown RBP11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 FBXL6Q8N531 539 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 PYM1Q9BRP8 204 aaKnown RBP11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 PANK2Q9BZ23 570 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 TRIM9Q9C026 710 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 TMEM206Q9H813 350 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 KCNK12Q9HB15 430 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 FBXL5Q9UKA1 691 aa11.29□□□□□ -0.6
PTCD2P1-201ENST00000554393 DCHS1Q96JQ0 3298 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 ANO9A1A5B4 782 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 TISP43B9A030 160 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 KIAA0391O15091 583 aaKnown RBP11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 IL18RAPO95256 599 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 LDHAP00338 332 aaKnown RBP11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 LAMP2P13473 410 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 ATF2P15336 505 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 TYMPP19971 482 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 FSHRP23945 695 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 CASP5P51878 434 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 YWHAHQ04917 246 aaPredicted RBP11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 KCNA1Q09470 495 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 PKP1Q13835 747 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 CTXN3Q4LDR2 81 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 FOXD4L5Q5VV16 416 aaPredicted RBP11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 C9orf57Q5W0N0 161 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 RESP18Q5W5W9 173 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 CRELD2Q6UXH1 353 aaPredicted RBP11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 TCEAL8Q8IYN2 117 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 FOXD4L4Q8WXT5 416 aaPredicted RBP11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 DHX58Q96C10 678 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 MYADMQ96S97 322 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 PRRX2Q99811 253 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 AVENQ9NQS1 362 aaPredicted RBP11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 FAM13BQ9NYF5 915 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 TBC1D7Q9P0N9 293 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 RCOR1Q9UKL0 485 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 KCNH3Q9ULD8 1083 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 DUSP12Q9UNI6 340 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 CACNA1HO95180 2353 aa11.28□□□□□ -0.6
PTCD2P1-201ENST00000554393 ANHXE9PGG2 379 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 PIRO00625 290 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 EIF3DO15371 548 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 CCL16O15467 120 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 KRT37O76014 449 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 NFICP08651 508 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 ELF1P32519 619 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 ME1P48163 572 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 GUCY2FP51841 1108 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 LILRA4P59901 499 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 DNM1Q05193 864 aaKnown RBP11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 DSTYKQ6XUX3 929 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 GET4Q7L5D6 327 aaPredicted RBP11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 ERMP1Q7Z2K6 904 aa11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 GRASPQ7Z6J2 395 aaPredicted RBP11.27□□□□□ -0.61
PTCD2P1-201ENST00000554393 BRSK2Q8IWQ3 736 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms