RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 AMOTL1Q8IY63 956 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 IFNL3Q8IZI9 196 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 FANCBQ8NB91 859 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 OR8K1Q8NGG5 319 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 IPO4Q8TEX9 1081 aaKnown RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 USP6NLQ92738 828 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 P2RX7Q99572 595 aaKnown RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 SENP6Q9GZR1 1112 aaPredicted RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 THAP9Q9H5L6 903 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 ANKZF1Q9H8Y5 726 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 SH3GLB2Q9NR46 395 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 ABHD10Q9NUJ1 306 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 VPS18Q9P253 973 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 RNF14Q9UBS8 474 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 TMEM59LQ9UK28 342 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 RRP15Q9Y3B9 282 aaKnown RBP6.49□□□□□ -1.37
VPS33B-203ENST00000554264 LOC285556D6RIA3 1793 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 ABCB11O95342 1321 aa6.49□□□□□ -1.37
VPS33B-203ENST00000554264 MYH1P12882 1939 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 A0A1W2PQJ5 194 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 BTBD18B2RXH4 712 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 B4E1Z4 1266 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 GOLGA8KD6RF30 607 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 H0Y8X5 98 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 DNM1LO00429 736 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 PSMA7O14818 248 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 IDH1O75874 414 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 FGFR1OPO95684 399 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 CPP00450 1065 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 FOSL2P15408 326 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 VAV1P15498 845 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 TNFRSF8P28908 595 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 TRHRP34981 398 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 MCAMP43121 646 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 TDO2P48775 406 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 DNM2P50570 870 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 TOB1P50616 345 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 RTP1P59025 263 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 AMPD2Q01433 879 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 RBL2Q08999 1139 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 PPFIA1Q13136 1202 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 RASGRF1Q13972 1273 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 GLE1Q53GS7 698 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 COBLL1Q53SF7 1204 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 DNAJC21Q5F1R6 531 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 PAPD7Q5XG87 772 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 C6orf15Q6UXA7 325 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 RNF111Q6ZNA4 994 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 APTXQ7Z2E3 356 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 TRAPPC11Q7Z392 1133 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 ZNF572Q7Z3I7 529 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 CATIPQ7Z7H3 387 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 RPAINQ86UA6 219 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 IQCA1Q86XH1 822 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 FIBCD1Q8N539 461 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 CELF2-AS1Q8N7Q2 184 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 SPATA5Q8NB90 893 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 AFAP1L1Q8TED9 768 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 LINC01599Q8WXQ3 324 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 LPAR1Q92633 364 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 PHKBQ93100 1093 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 PAGE5Q96GU1 130 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 CLIC6Q96NY7 704 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 NUP88Q99567 741 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 DNAJC7Q99615 494 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 CRACR2AQ9BSW2 395 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 PHF20Q9BVI0 1012 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 CSRNP2Q9H175 543 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 DHX36Q9H2U1 1008 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 MRPL44Q9H9J2 332 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 TXNRD2Q9NNW7 524 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 LUC7LQ9NQ29 371 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 ACTR10Q9NZ32 417 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 MAGEC2Q9UBF1 373 aaPredicted RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 PI4KBQ9UBF8 816 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 RBPJLQ9UBG7 517 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 APEX2Q9UBZ4 518 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 DDX20Q9UHI6 824 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 LUC7L2Q9Y383 392 aaKnown RBP6.48□□□□□ -1.37
VPS33B-203ENST00000554264 SAR1BQ9Y6B6 198 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 DOCK3Q8IZD9 2030 aa6.48□□□□□ -1.37
VPS33B-203ENST00000554264 A0A087WWV3 80 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 SLC15A5A6NIM6 579 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 NOTOA8MTQ0 251 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 LGALS16A8MUM7 142 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 EIF3CLB5ME19 914 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 KLF4O43474 513 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 USO1O60763 962 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 SHOX2O60902 331 aaPredicted RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 DTNBO60941 627 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 SEC31AO94979 1220 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 ZNF205O95201 554 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 NDUFA10O95299 355 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 EFEMP2O95967 443 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 GYPCP04921 128 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 RPL10P27635 214 aaKnown RBP6.47□□□□□ -1.37
VPS33B-203ENST00000554264 CNGA1P29973 690 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 ADORA1P30542 326 aa6.47□□□□□ -1.37
VPS33B-203ENST00000554264 CASP14P31944 242 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms