RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 SCYL3Q8IZE3 742 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 MAIP1Q8WWC4 291 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 ACSF2Q96CM8 615 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-211ENST00000553882 KIAA1586Q9HCI6 787 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 HOMER3Q9NSC5 361 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 FGFR1OP2Q9NVK5 253 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 NINJ2Q9NZG7 142 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 GSTTP1A0A1W2PQM5 241 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 TTLL13PA6NNM8 815 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 TCP11X1B4DZS4 312 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 ASAP2O43150 1006 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 CETPP11597 493 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 ATF7P17544 494 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-211ENST00000553882 MAN1A1P33908 653 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 GMPSP49915 693 aaPredicted RBP15.47■□□□□ 0.07
ACTN1-211ENST00000553882 FAM133BQ5BKY9 247 aaKnown RBP15.47■□□□□ 0.07
ACTN1-211ENST00000553882 CYP4F22Q6NT55 531 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 VSTM1Q6UX27 236 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 FUKQ8N0W3 1084 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 GLIS1Q8NBF1 620 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 SERPINB12Q96P63 405 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 ACAD9Q9H845 621 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF302Q9NR11 478 aa15.47■□□□□ 0.07
ACTN1-211ENST00000553882 SPATA31C2B4DYI2 1134 aa15.46■□□□□ 0.07
ACTN1-211ENST00000553882 ZNF280AP59817 542 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-211ENST00000553882 CNTN2Q02246 1040 aa15.46■□□□□ 0.07
ACTN1-211ENST00000553882 ZKSCAN8Q15776 578 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-211ENST00000553882 HP1BP3Q5SSJ5 553 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-211ENST00000553882 IZUMO3Q5VZ72 239 aa15.46■□□□□ 0.07
ACTN1-211ENST00000553882 CYB5D1Q6P9G0 228 aa15.46■□□□□ 0.07
ACTN1-211ENST00000553882 SLC7A3Q8WY07 619 aa15.46■□□□□ 0.07
ACTN1-211ENST00000553882 FAM212AQ96EL1 285 aa15.46■□□□□ 0.07
ACTN1-211ENST00000553882 CDHR1Q96JP9 859 aa15.46■□□□□ 0.07
ACTN1-211ENST00000553882 TEX13BQ9BXU2 312 aa15.46■□□□□ 0.07
ACTN1-211ENST00000553882 KDM4CQ9H3R0 1056 aa15.46■□□□□ 0.07
ACTN1-211ENST00000553882 MRPL47Q9HD33 250 aaKnown RBP15.46■□□□□ 0.07
ACTN1-211ENST00000553882 PPP1R1BQ9UD71 204 aaPredicted RBP15.46■□□□□ 0.07
ACTN1-211ENST00000553882 NFASCO94856 1347 aa15.46■□□□□ 0.06
ACTN1-211ENST00000553882 H0YCG3 227 aa15.46■□□□□ 0.06
ACTN1-211ENST00000553882 PSTPIP1O43586 416 aa15.46■□□□□ 0.06
ACTN1-211ENST00000553882 CLTAP09496 248 aa15.46■□□□□ 0.06
ACTN1-211ENST00000553882 NCOA4Q13772 614 aa15.46■□□□□ 0.06
ACTN1-211ENST00000553882 PRKG1Q13976 671 aa15.46■□□□□ 0.06
ACTN1-211ENST00000553882 MPP2Q14168 576 aa15.46■□□□□ 0.06
ACTN1-211ENST00000553882 SRRM1Q8IYB3 904 aaKnown RBP15.46■□□□□ 0.06
ACTN1-211ENST00000553882 PORCNQ9H237 461 aa15.46■□□□□ 0.06
ACTN1-211ENST00000553882 ABCF3Q9NUQ8 709 aa15.46■□□□□ 0.06
ACTN1-211ENST00000553882 OATP04181 439 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 ZSCAN5DPP0CG00 497 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 BRAFP15056 766 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 TNFSF9P41273 254 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 P3H1Q32P28 736 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 LACTB2Q53H82 288 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-211ENST00000553882 NUGGCQ68CJ6 796 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 SYDE1Q6ZW31 735 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-211ENST00000553882 HAUS1Q96CS2 278 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 FHDC1Q9C0D6 1143 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-211ENST00000553882 VPS33BQ9H267 617 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 CCDC134Q9H6E4 229 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 NEU2Q9Y3R4 380 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 PARP14Q460N5 1801 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 HGSO14964 777 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-211ENST00000553882 CST3P01034 146 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-211ENST00000553882 POTEJP0CG39 1038 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 IBSPP21815 317 aaPredicted RBP15.45■□□□□ 0.06
ACTN1-211ENST00000553882 CCNG2Q16589 344 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 ZBTB33Q86T24 672 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 KATNAL2Q8IYT4 538 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 CCDC89Q8N998 374 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 DHX33Q9H6R0 707 aaKnown RBP15.45■□□□□ 0.06
ACTN1-211ENST00000553882 PIM2Q9P1W9 311 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 DNPEPQ9ULA0 475 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 STYXL1Q9Y6J8 313 aa15.45■□□□□ 0.06
ACTN1-211ENST00000553882 A0A0B4J269 797 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 ETS1P14921 441 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 PTP4A2Q12974 167 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 PLEKHA7Q6IQ23 1121 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 CAPN12Q6ZSI9 719 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 TRPM8Q7Z2W7 1104 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 ZNF606Q8WXB4 792 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 MCEEQ96PE7 176 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 TCHPQ9BT92 498 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 NSRP1Q9H0G5 558 aaKnown RBP15.44■□□□□ 0.06
ACTN1-211ENST00000553882 AS3MTQ9HBK9 375 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 RGPD3A6NKT7 1758 aaPredicted RBP15.44■□□□□ 0.06
ACTN1-211ENST00000553882 RGPD4Q7Z3J3 1758 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 CNTNAP2Q9UHC6 1331 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 F8VP50 259 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 SNX3O60493 162 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 NAMPTP43490 491 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
ACTN1-211ENST00000553882 ITIH4Q14624 930 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 TXNRD3NBQ6F5E7 133 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 FEZF2Q8TBJ5 459 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 RBM15Q96T37 977 aaKnown RBP eCLIP15.44■□□□□ 0.06
ACTN1-211ENST00000553882 CGRRF1Q99675 332 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 GINM1Q9NU53 330 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 PARVAQ9NVD7 372 aa15.44■□□□□ 0.06
ACTN1-211ENST00000553882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.44■□□□□ 0.06
ACTN1-211ENST00000553882 NAALADL1Q9UQQ1 740 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms