RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 PRKCIP41743 596 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 ARID5AQ03989 594 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 KLHL30Q0D2K2 578 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 NAB2Q15742 525 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 WDR72Q3MJ13 1102 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 CLLU1OSQ5K130 101 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 IRF2BP2Q7Z5L9 587 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 GPIHBP1Q8IV16 184 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 FAM71AQ8IYT1 594 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 URGCPQ8TCY9 931 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 ZNF560Q96MR9 790 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 ARID3AQ99856 593 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 GOLGA2P5Q9HBQ8 144 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
NEK9-202ENST00000553823 LRFN2Q9ULH4 789 aa12.61□□□□□ -0.39
NEK9-202ENST00000553823 BZW2Q9Y6E2 419 aaKnown RBP12.61□□□□□ -0.39
NEK9-202ENST00000553823 FNDC1Q4ZHG4 1894 aaPredicted RBP12.61□□□□□ -0.39
NEK9-202ENST00000553823 ABHD14A-ACY1A0A1B0GW23 586 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 SSU72P8A0A1W2PR75 194 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 SOWAHDA6NJG2 315 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 PPEF2O14830 753 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 HOXA2O43364 376 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 EVI5O60447 810 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 FGFR1P11362 822 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 KRT5P13647 590 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 CSF2RAP15509 400 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 RPL9P32969 192 aaKnown RBP12.6□□□□□ -0.39
NEK9-202ENST00000553823 USP8P40818 1118 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 ASPAP45381 313 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 YWHAEP62258 255 aaKnown RBP12.6□□□□□ -0.39
NEK9-202ENST00000553823 TDRD12Q587J7 1177 aaKnown RBP12.6□□□□□ -0.39
NEK9-202ENST00000553823 NOMO2Q5JPE7 1267 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 HGSNATQ68CP4 663 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 SMYD5Q6GMV2 418 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 SCARA5Q6ZMJ2 495 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 NPAS4Q8IUM7 802 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 ABI1Q8IZP0 508 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 BCO2Q9BYV7 579 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 CYP3A43Q9HB55 503 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 ARHGAP20Q9P2F6 1191 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 KANSL3Q9P2N6 904 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 PYCARDQ9ULZ3 195 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 POLIQ9UNA4 740 aa12.6□□□□□ -0.39
NEK9-202ENST00000553823 PODXLO00592 558 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 CYP26A1O43174 497 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 EFCAB14O75071 495 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 PLEKP08567 350 aaPredicted RBP12.59□□□□□ -0.39
NEK9-202ENST00000553823 ACO1P21399 889 aaKnown RBP12.59□□□□□ -0.39
NEK9-202ENST00000553823 CYLC1P35663 651 aaPredicted RBP12.59□□□□□ -0.39
NEK9-202ENST00000553823 EIF4A3P38919 411 aaKnown RBP12.59□□□□□ -0.39
NEK9-202ENST00000553823 KCNJ6P48051 423 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 TAF6P49848 677 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 TNNC1P63316 161 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 TUSC3Q13454 348 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 MTF1Q14872 753 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 SV2CQ496J9 727 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 RAD9BQ6WBX8 426 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 ZSCAN30Q86W11 494 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 CCDC170Q8IYT3 715 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 C7orf61Q8IZ16 206 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 CRIPAKQ8N1N5 446 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 UBR7Q8N806 425 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 RSPH1Q8WYR4 309 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
NEK9-202ENST00000553823 CCDC42Q96M95 316 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 HTATIP2Q9BUP3 242 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 DEF6Q9H4E7 631 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 FAM124BQ9H5Z6 455 aaPredicted RBP12.59□□□□□ -0.39
NEK9-202ENST00000553823 HAUS4Q9H6D7 363 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 NHEJ1Q9H9Q4 299 aaPredicted RBP12.59□□□□□ -0.39
NEK9-202ENST00000553823 IL23AQ9NPF7 189 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.59□□□□□ -0.39
NEK9-202ENST00000553823 PCDHB4Q9Y5E5 795 aa12.59□□□□□ -0.39
NEK9-202ENST00000553823 EPN1Q9Y6I3 576 aaPredicted RBP12.59□□□□□ -0.39
NEK9-202ENST00000553823 CASTOR2A6NHX0 329 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 KPNA7A9QM74 516 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 WEE2P0C1S8 567 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 ANXA13P27216 316 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 CLCN1P35523 988 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 CLCNKBP51801 687 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 BPIFB4P59827 614 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 PTK2Q05397 1052 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 PPIGQ13427 754 aaKnown RBP eCLIP12.58□□□□□ -0.43e-6■■□□□ 13.6
NEK9-202ENST00000553823 TMEM270Q6UE05 265 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.58□□□□□ -0.4
NEK9-202ENST00000553823 TTC39CQ8N584 583 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 KIAA1524Q8TCG1 905 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 ABHD8Q96I13 439 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 UROC1Q96N76 676 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 MMS19Q96T76 1030 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 SMYD3Q9H7B4 428 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 CISHQ9NSE2 258 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 TBC1D13Q9NVG8 400 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 GDAP2Q9NXN4 497 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 CNTN6Q9UQ52 1028 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.4
NEK9-202ENST00000553823 SPTLC1O15269 473 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 AKR1B10O60218 316 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 BAIAP3O94812 1187 aa12.57□□□□□ -0.4
NEK9-202ENST00000553823 NDUFA10O95299 355 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms