RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 ZNF507Q8TCN5 953 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 FBF1Q8TES7 1133 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 TRIB2Q92519 343 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 HVCN1Q96D96 273 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 ACCSQ96QU6 501 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 CTAGE1Q96RT6 745 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 PCYT2Q99447 389 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 REEP2Q9BRK0 252 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 NTPCRQ9BSD7 190 aaKnown RBP5.5□□□□□ -1.53
VTI1B-202ENST00000553619 DHX33Q9H6R0 707 aaKnown RBP5.5□□□□□ -1.53
VTI1B-202ENST00000553619 BCAS3Q9H6U6 928 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 GRPEL1Q9HAV7 217 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 CBX8Q9HC52 389 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 SLC39A2Q9NP94 309 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 PDLIM7Q9NR12 457 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 CRIM1Q9NZV1 1036 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 SLC5A6Q9Y289 635 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 TRIM17Q9Y577 477 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 U3KQE9 123 aa5.5□□□□□ -1.53
VTI1B-202ENST00000553619 UBE4BO95155 1302 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 NRCAMQ92823 1304 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 FSD2A1L4K1 749 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 CCDC169A6NNP5 214 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 PDXKO00764 312 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 MAFO75444 373 aaPredicted RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 STBD1O95210 358 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 GCNT3O95395 438 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 GNA14O95837 355 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 C6orf222P0C671 652 aaPredicted RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 FAM87AP0C7U9 286 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 INSRRP14616 1297 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 CASP1P29466 404 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 ZNF131P52739 623 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 NPEPPSP55786 919 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 FKBP3Q00688 224 aaKnown RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 NCBP1Q09161 790 aaKnown RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 KCNA1Q09470 495 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 RAD51AP2Q09MP3 1159 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 STK4Q13043 487 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 IQCB1Q15051 598 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 PLCL1Q15111 1095 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 TARBP2Q15633 366 aaKnown RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 FSCN1Q16658 493 aaKnown RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 UGCGQ16739 394 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 KNOP1Q1ED39 458 aaKnown RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 DPCR1Q3MIW9 517 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 FILIP1LQ4L180 1135 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 CENPPQ6IPU0 288 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 KLHL10Q6JEL2 608 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 EFCAB12Q6NXP0 572 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 MAEAQ7L5Y9 396 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 HAUS6Q7Z4H7 955 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 SYCP3Q8IZU3 236 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 PLD6Q8N2A8 252 aaKnown RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 NME8Q8N427 588 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 AOPEPQ8N6M6 819 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 C7orf31Q8N865 590 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 FAM181AQ8N9Y4 354 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 RNF214Q8ND24 703 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 LRRC15Q8TF66 581 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 NELFBQ8WX92 580 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 PSPC1Q8WXF1 523 aaKnown RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 P2RX5Q93086 422 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 FANCD2OSQ96PS1 177 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 MAP7D2Q96T17 732 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 C16orf70Q9BSU1 422 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 MTG1Q9BT17 334 aaPredicted RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 INO80BQ9C086 356 aaPredicted RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 CEP44Q9C0F1 390 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 UPF3AQ9H1J1 476 aaKnown RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 C2orf40Q9H1Z8 148 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 ST6GALNAC4Q9H4F1 302 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 XPNPEP3Q9NQH7 507 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 KMT5AQ9NQR1 393 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 WRAP73Q9P2S5 460 aaPredicted RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 MAGEC2Q9UBF1 373 aaPredicted RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 DDX20Q9UHI6 824 aaKnown RBP5.49□□□□□ -1.53
VTI1B-202ENST00000553619 PTPN22Q9Y2R2 807 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 PCDHGC5Q9Y5F6 944 aa5.49□□□□□ -1.53
VTI1B-202ENST00000553619 LRRC37A2A6NM11 1700 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 EVPLQ92817 2033 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 IGKV6-21A0A0C4DH24 114 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 NPHP3-ACAD11A0A0J9YXS1 232 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 C17orf102A2RUQ5 167 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 GOLGA6L6A8MZA4 724 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 K7ENM7 598 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 K7ERI5 159 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 KIAA0391O15091 583 aaKnown RBP5.48□□□□□ -1.53
VTI1B-202ENST00000553619 CETN3O15182 167 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 TREHO43280 583 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 LDHAP00338 332 aaKnown RBP5.48□□□□□ -1.53
VTI1B-202ENST00000553619 SERPINC1P01008 464 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 C8AP07357 584 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 BMP6P22004 513 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 KLRC1P26715 233 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 MARK3P27448 753 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 CST5P28325 142 aaPredicted RBP5.48□□□□□ -1.53
VTI1B-202ENST00000553619 ARL2P36404 184 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 NAMPTP43490 491 aa5.48□□□□□ -1.53
VTI1B-202ENST00000553619 CTCFP49711 727 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms