RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 WDR6Q9NNW5 1121 aaKnown RBP16.59■□□□□ 0.25
SHMT2-204ENST00000553324 TSHZ2Q9NRE2 1034 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 AGPAT3Q9NRZ7 376 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 HSPBP1Q9NZL4 362 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 R3HCC1Q9Y3T6 440 aaKnown RBP16.59■□□□□ 0.25
SHMT2-204ENST00000553324 CITO14578 2027 aa16.58■□□□□ 0.25
SHMT2-204ENST00000553324 BDP1A6H8Y1 2624 aa16.58■□□□□ 0.25
SHMT2-204ENST00000553324 GOLGA8IPA6NC78 632 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 GOLGA8JA6NMD2 632 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 ADAM12O43184 909 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 TGFB1I1O43294 461 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 XYLBO75191 536 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 ABLIM3O94929 683 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 RPN1P04843 607 aaKnown RBP16.58■□□□□ 0.24
SHMT2-204ENST00000553324 C8AP07357 584 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 POU2F2P09086 479 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 WEE2P0C1S8 567 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 ODC1P11926 461 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 ATF2P15336 505 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 TAF6P49848 677 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 GUCY2FP51841 1108 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 TFAMQ00059 246 aaKnown RBP16.58■□□□□ 0.24
SHMT2-204ENST00000553324 RSPO2Q6UXX9 243 aaPredicted RBP16.58■□□□□ 0.24
SHMT2-204ENST00000553324 NELFCDQ8IXH7 590 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 C12orf56Q8IXR9 622 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 ZDHHC14Q8IZN3 488 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 TDRD5Q8NAT2 981 aaKnown RBP16.58■□□□□ 0.24
SHMT2-204ENST00000553324 XXYLT1Q8NBI6 393 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 SENP8Q96LD8 212 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 FBXL5Q9UKA1 691 aa16.58■□□□□ 0.24
SHMT2-204ENST00000553324 OR6C75A6NL08 312 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 PRPF40AO75400 957 aaKnown RBP16.57■□□□□ 0.24
SHMT2-204ENST00000553324 ROR1Q01973 937 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 STK4Q13043 487 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 DUOXA2Q1HG44 320 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 SV2CQ496J9 727 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 METTL23Q86XA0 190 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 EFCAB13Q8IY85 973 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 TMEM174Q8WUU8 243 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 ZNF707Q96C28 371 aaPredicted RBP16.57■□□□□ 0.24
SHMT2-204ENST00000553324 ANKRD36BP1Q96IX9 119 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 ZNF560Q96MR9 790 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 EPHX3Q9H6B9 360 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.57■□□□□ 0.24
SHMT2-204ENST00000553324 HOOK1Q9UJC3 728 aaKnown RBP16.57■□□□□ 0.24
SHMT2-204ENST00000553324 ITGA11Q9UKX5 1188 aa16.57■□□□□ 0.24
SHMT2-204ENST00000553324 KPNA7A9QM74 516 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 RHOBTB3O94955 611 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 CYP11A1P05108 521 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 TMEM191BP0C7N4 346 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 ARPP19P56211 112 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 RBP5P82980 135 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 DPYDQ12882 1025 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 MYBPC2Q14324 1141 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 KCNB1Q14721 858 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 SNRNP35Q16560 246 aaKnown RBP16.56■□□□□ 0.24
SHMT2-204ENST00000553324 OVOS1Q6IE37 1185 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 THEM5Q8N1Q8 247 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 CSGALNACT2Q8N6G5 542 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 LRRC52Q8N7C0 313 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 ZSWIM2Q8NEG5 633 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 SLC7A14Q8TBB6 771 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 KHSRPQ92945 711 aaKnown RBP eCLIP16.56■□□□□ 0.24
SHMT2-204ENST00000553324 FNBP1Q96RU3 617 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 GOLPH3LQ9H4A5 285 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 PDE11AQ9HCR9 933 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 AFF4Q9UHB7 1163 aaKnown RBP16.56■□□□□ 0.24
SHMT2-204ENST00000553324 CDH22Q9UJ99 828 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 TRIP11Q15643 1979 aa16.56■□□□□ 0.24
SHMT2-204ENST00000553324 WDR27A2RRH5 827 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 C2CD4DB7Z1M9 353 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 PDXKO00764 312 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 CYB561D2O14569 222 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 PRRG1O14668 218 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 CLIC2O15247 247 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 GPR37L1O60883 481 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 TNNC2P02585 160 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 ANP32AP39687 249 aaKnown RBP16.55■□□□□ 0.24
SHMT2-204ENST00000553324 CBWD2Q8IUF1 395 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 WDR49Q8IV35 697 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 TCEAL8Q8IYN2 117 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 FMR1NBQ8N0W7 255 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-204ENST00000553324 RDH13Q8NBN7 331 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 KIAA0895Q8NCT3 520 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 EDAQ92838 391 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 CYP4F11Q9HBI6 524 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 INTS13Q9NVM9 706 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 MUTYHQ9UIF7 546 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 AGAP1Q9UPQ3 857 aa16.55■□□□□ 0.24
SHMT2-204ENST00000553324 TIMM13Q9Y5L4 95 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-204ENST00000553324 ZFP37Q9Y6Q3 630 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-204ENST00000553324 CLUHO75153 1309 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 PPEF2O14830 753 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 SPTLC1O15269 473 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 CALUO43852 315 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-204ENST00000553324 EXOC3O60645 756 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 LRG1P02750 347 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 ITGB3P05106 788 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 CPB1P15086 417 aa16.54■□□□□ 0.24
SHMT2-204ENST00000553324 SP100P23497 879 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms