RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 NHSQ6T4R5 1651 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 BTAF1O14981 1849 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 FOCADQ5VW36 1801 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 UBE4BO95155 1302 aa6.48□□□□□ -1.37
CHMP4A-210ENST00000552620 LY75O60449 1722 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 NPHP3-ACAD11A0A0J9YXS1 232 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 CHURC1-FNTBB4DL54 471 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 PGRMC1O00264 195 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 ENPP3O14638 875 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 KCNK3O14649 394 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 RAD51CO43502 376 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 CEP104O60308 925 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 DNAJA2O60884 412 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 TBCAO75347 108 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 FTCDO95954 541 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 NR3C1P04150 777 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 SPATA31C1P0DKV0 1188 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 EEF2P13639 858 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 SLC9A1P19634 815 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 ALDH1B1P30837 517 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 PSMC2P35998 433 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 CCNFP41002 786 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 CCT5P48643 541 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 JAM2P57087 298 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 SPIRE1Q08AE8 756 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 PPP2R5AQ15172 486 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 BBS9Q3SYG4 887 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 CERKLQ49MI3 558 aaPredicted RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 AGBL2Q5U5Z8 902 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 EGFLAMQ63HQ2 1017 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 ANKRD34AQ69YU3 496 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 APOBEC3HQ6NTF7 200 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 TATDN1Q6P1N9 297 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 USP17L6PQ6QN14 398 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 VHLLQ6RSH7 139 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 BTNL9Q6UXG8 535 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 LINC00114Q6XXX2 140 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 TMEM179Q6ZVK1 233 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 KCTD1Q719H9 257 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 EEPD1Q7L9B9 569 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 PODNQ7Z5L7 613 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 TADA2BQ86TJ2 420 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 PHACTR4Q8IZ21 702 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 LRRC57Q8N9N7 239 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 C12orf50Q8NA57 414 aaPredicted RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 ST13P5Q8NFI4 369 aaPredicted RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 BORCS6Q96GS4 357 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 ATP6V1G3Q96LB4 118 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 DHRS1Q96LJ7 313 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 RNPC3Q96LT9 517 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 ZDHHC15Q96MV8 337 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 CCDC43Q96MW1 224 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 SLC9A7Q96T83 725 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 PSMB7Q99436 277 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 NAP1L3Q99457 506 aaPredicted RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 IDI2Q9BXS1 227 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 FGFBP2Q9BYJ0 223 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 STK33Q9BYT3 514 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 EPN3Q9H201 632 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 ZHX3Q9H4I2 956 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 TMBIM4Q9HC24 238 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 SSU72Q9NP77 194 aaKnown RBP6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 OLFML3Q9NRN5 406 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 FAM114A2Q9NRY5 505 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 SMARCAL1Q9NZC9 954 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 KCND2Q9NZV8 630 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 SEL1LQ9UBV2 794 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 TJP2Q9UDY2 1190 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 FAM169AQ9Y6X4 670 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 GRIN2DO15399 1336 aa6.47□□□□□ -1.37
CHMP4A-210ENST00000552620 MYH7BA7E2Y1 1941 aa6.46□□□□□ -1.37
CHMP4A-210ENST00000552620 TAF1LQ8IZX4 1826 aa6.46□□□□□ -1.37
CHMP4A-210ENST00000552620 ZNF233A6NK53 670 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 F5H6K3 240 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 GCOM1H8Y6P7 765 aaPredicted RBP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 POLRMTO00411 1230 aaKnown RBP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 NDUFAB1O14561 156 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 AKAP3O75969 853 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 ERLIN2O94905 339 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 MYZAPP0CAP1 466 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 ZBTB48P10074 688 aaPredicted RBP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 ACRP10323 421 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 NPR1P16066 1061 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 NR1D1P20393 614 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 HOXD13P35453 343 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 SOX5P35711 763 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 STAT3P40763 770 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 MDH1P40925 334 aaKnown RBP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 SNRPNP63162 240 aaKnown RBP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 KLRC3Q07444 240 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 PABPC4Q13310 644 aaKnown RBP eCLIP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 TTLL4Q14679 1199 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 TCEAL1Q15170 157 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 PRR16Q569H4 304 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 SYDE2Q5VT97 1194 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 PEX26Q7Z412 305 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 YTHDF3Q7Z739 585 aaKnown RBP6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 CROCCP2Q86T23 111 aa6.46□□□□□ -1.38
CHMP4A-210ENST00000552620 SFR1Q86XK3 245 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms