RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 EDEM3Q9BZQ6 932 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 ELAC1Q9H777 363 aaKnown RBP9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 SNX9Q9Y5X1 595 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 ABHD14A-ACY1A0A1B0GW23 586 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 PODXLO00592 558 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 CYP3A5P20815 502 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 ATICP31939 592 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 CDH8P55286 799 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 DEFB103AP81534 67 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 GRIK3Q13003 919 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 CUL2Q13617 745 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 ZNF280BQ86YH2 543 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 NPAS4Q8IUM7 802 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 CXorf38Q8TB03 319 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 PANX2Q96RD6 677 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 DNAJC7Q99615 494 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 PAAF1Q9BRP4 392 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 NAA15Q9BXJ9 866 aaKnown RBP9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 NIF3L1Q9GZT8 377 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 XYLT2Q9H1B5 865 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 KCNF1Q9H3M0 494 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 PCDHB4Q9Y5E5 795 aa9.36□□□□□ -0.91
AC055716.2-201ENST00000552545 F8VZ95 297 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 DDHD2O94830 711 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 PFKMP08237 780 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 P4HA1P13674 534 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 RFX1P22670 979 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 TBXAS1P24557 533 aaPredicted RBP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 IGFBP6P24592 240 aaPredicted RBP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 SOX5P35711 763 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 OR1G1P47890 313 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 TAF6P49848 677 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 ZNF394Q53GI3 561 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 E4F1Q66K89 784 aaPredicted RBP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 TAF4BQ92750 862 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 ZNF560Q96MR9 790 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 CHP1Q99653 195 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 TBC1D13Q9NVG8 400 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 KANSL3Q9P2N6 904 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 FBXL5Q9UKA1 691 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 FNDC1Q4ZHG4 1894 aaPredicted RBP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 FAM170AA1A519 330 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 KPNA7A9QM74 516 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 PIRO00625 290 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 CYP26A1O43174 497 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 HOXA2O43364 376 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 B3GAT3O94766 335 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 PLEKP08567 350 aaPredicted RBP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 JAM2P57087 298 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 WDR5P61964 334 aaKnown RBP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 GCNT1Q02742 428 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 KLHL30Q0D2K2 578 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 TUSC3Q13454 348 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 NAB2Q15742 525 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 SPOUT1Q5T280 376 aaKnown RBP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 TMEM270Q6UE05 265 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 C16orf59Q7L2K0 433 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 PLCD3Q8N3E9 789 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 CASD1Q96PB1 797 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 DEF6Q9H4E7 631 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 SMYD3Q9H7B4 428 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 SEPT11Q9NVA2 429 aaKnown RBP9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 DNAJB4Q9UDY4 337 aa9.35□□□□□ -0.91
AC055716.2-201ENST00000552545 ANO9A1A5B4 782 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 SOWAHDA6NJG2 315 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 I3L4J1 428 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 CALCAP01258 141 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 LRPAP1P30533 357 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 PNPLA4P41247 253 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 ASPAP45381 313 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 EPHB4P54760 987 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 LILRA4P59901 499 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 ORC1Q13415 861 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 SV2CQ496J9 727 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 WDR59Q6PJI9 974 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 CYP26C1Q6V0L0 522 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 DSTYKQ6XUX3 929 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 ENOSF1Q7L5Y1 443 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 LRRC52Q8N7C0 313 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 FAM81BQ96LP2 452 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 GPR88Q9GZN0 384 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 HAUS4Q9H6D7 363 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 ACP6Q9NPH0 428 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 CISHQ9NSE2 258 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 PUF60Q9UHX1 559 aaKnown RBP9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 PRG3Q9Y2Y8 225 aaPredicted RBP9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 LTBP2Q14767 1821 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 F8W810 466 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 SPTLC1O15269 473 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 HUS1O60921 280 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 FERP16591 822 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 RPL9P32969 192 aaKnown RBP9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 CCZ1BP86790 482 aa9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 CCZ1P86791 482 aaPredicted RBP9.34□□□□□ -0.91
AC055716.2-201ENST00000552545 MTF1Q14872 753 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms