RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 TPGS2Q68CL5 300 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 USP37Q86T82 979 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 GPD1LQ8N335 351 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 ZSWIM2Q8NEG5 633 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 SLC7A14Q8TBB6 771 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 CACTINQ8WUQ7 758 aaKnown RBP20.56■□□□□ 0.88
DDX54-208ENST00000551344 PCIF1Q9H4Z3 704 aa20.56■□□□□ 0.88
DDX54-208ENST00000551344 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.56■□□□□ 0.88
DDX54-208ENST00000551344 UBE4BO95155 1302 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.55■□□□□ 0.88
DDX54-208ENST00000551344 A0A1W2PQ27 194 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 A0A1W2PQ64 194 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 A0A1W2PQD8 194 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 WDR27A2RRH5 827 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 FAM86C2PA6NEL3 165 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 SYKP43405 635 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 EFCAB13Q8IY85 973 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 SENP8Q96LD8 212 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 KIAA1586Q9HCI6 787 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 RBAKQ9NYW8 714 aaPredicted RBP20.55■□□□□ 0.88
DDX54-208ENST00000551344 SORCS3Q9UPU3 1222 aa20.55■□□□□ 0.88
DDX54-208ENST00000551344 MYO10Q9HD67 2058 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 GOLGA8IPA6NC78 632 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 ZNF233A6NK53 670 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 GOLGA8JA6NMD2 632 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 PPEF2O14830 753 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 ARPP19P56211 112 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 PSMD2Q13200 908 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 TRIM67Q6ZTA4 783 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 TCEAL8Q8IYN2 117 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 GRAMD1CQ8IYS0 662 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 SCFD1Q8WVM8 642 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 SLC39A2Q9NP94 309 aa20.54■□□□□ 0.88
DDX54-208ENST00000551344 CGNQ9P2M7 1197 aaKnown RBP20.54■□□□□ 0.88
DDX54-208ENST00000551344 TIMM13Q9Y5L4 95 aaPredicted RBP20.54■□□□□ 0.88
DDX54-208ENST00000551344 SPTLC1O15269 473 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 CCL16O15467 120 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 TGFB1I1O43294 461 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 ODC1P11926 461 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 COL9A1P20849 921 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 GBP2P32456 591 aaPredicted RBP20.53■□□□□ 0.88
DDX54-208ENST00000551344 TAF6P49848 677 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 NDUFA8P51970 172 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 TFAMQ00059 246 aaKnown RBP20.53■□□□□ 0.88
DDX54-208ENST00000551344 SIGLEC14Q08ET2 396 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 SURF1Q15526 300 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 BMT2Q1RMZ1 405 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 GRASPQ7Z6J2 395 aaPredicted RBP20.53■□□□□ 0.88
DDX54-208ENST00000551344 UBALD2Q8IYN6 164 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 HSPBP1Q9NZL4 362 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 EPS15L1Q9UBC2 864 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 AFF4Q9UHB7 1163 aaKnown RBP20.53■□□□□ 0.88
DDX54-208ENST00000551344 DSEQ9UL01 958 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 C2orf16Q68DN1 1984 aa20.53■□□□□ 0.88
DDX54-208ENST00000551344 OR6C75A6NL08 312 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 PRRG1O14668 218 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 KLRC4O43908 158 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 N4BP1O75113 896 aaKnown RBP20.52■□□□□ 0.88
DDX54-208ENST00000551344 CYP11A1P05108 521 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 PNPLA4P41247 253 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 WNT7BP56706 349 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 MTMR3Q13615 1198 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 OVOS1Q6IE37 1185 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 HS2ST1Q7LGA3 356 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 BMP8AQ7Z5Y6 402 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 NOC3LQ8WTT2 800 aaKnown RBP20.52■□□□□ 0.88
DDX54-208ENST00000551344 CYP4F11Q9HBI6 524 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 AGPAT3Q9NRZ7 376 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 IGSF9Q9P2J2 1179 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 POLIQ9UNA4 740 aa20.52■□□□□ 0.88
DDX54-208ENST00000551344 ZFP37Q9Y6Q3 630 aaPredicted RBP20.52■□□□□ 0.88
DDX54-208ENST00000551344 TULP1O00294 542 aaPredicted RBP20.51■□□□□ 0.87
DDX54-208ENST00000551344 ASGR2P07307 311 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 FSHRP23945 695 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 MYBPC2Q14324 1141 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 KNOP1Q1ED39 458 aaKnown RBP20.51■□□□□ 0.87
DDX54-208ENST00000551344 NELFCDQ8IXH7 590 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 FSIP1Q8NA03 581 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 NXPE3Q969Y0 559 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 BORCS6Q96GS4 357 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 MYADMQ96S97 322 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 KCNK12Q9HB15 430 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 PDE11AQ9HCR9 933 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 EXOC1Q9NV70 894 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 ANK1P16157 1881 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 DENND4AQ7Z401 1863 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 TCHHQ07283 1943 aa20.51■□□□□ 0.87
DDX54-208ENST00000551344 TMEM221A6NGB7 291 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 KPNA7A9QM74 516 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 M0R296 226 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 CYB561D2O14569 222 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 LRG1P02750 347 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 LAMP2P13473 410 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 CPB1P15086 417 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 ADCY1Q08828 1119 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 STK4Q13043 487 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 GPR17Q13304 367 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 SV2CQ496J9 727 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 KMT5BQ4FZB7 885 aa20.5■□□□□ 0.87
DDX54-208ENST00000551344 METTL23Q86XA0 190 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms