RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 NOVP48745 357 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 EPC2Q52LR7 807 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 FAM178BQ8IXR5 827 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 PPM1KQ8N3J5 372 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 ZSWIM2Q8NEG5 633 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 LENG9Q96B70 501 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 NR1H4Q96RI1 486 aaPredicted RBP12.94□□□□□ -0.34
ERBB3-219ENST00000551242 ANKRD2Q9GZV1 360 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 DNAAF2Q9NVR5 837 aaKnown RBP12.94□□□□□ -0.34
ERBB3-219ENST00000551242 DMAC2Q9NW81 257 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 SLC17A7Q9P2U7 560 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 GTF3C4Q9UKN8 822 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 UMODL1Q5DID0 1318 aa12.94□□□□□ -0.34
ERBB3-219ENST00000551242 EIF3DO15371 548 aaKnown RBP eCLIP12.93□□□□□ -0.34
ERBB3-219ENST00000551242 CHMP2AO43633 222 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 SLURP2P0DP57 97 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 GZMAP12544 262 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 ARFIP2P53365 341 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 NOP14P78316 857 aaKnown RBP12.93□□□□□ -0.34
ERBB3-219ENST00000551242 PICALMQ13492 652 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 EFTUD2Q15029 972 aaKnown RBP eCLIP12.93□□□□□ -0.342e-7■■■■□ 22.5
ERBB3-219ENST00000551242 GSTA3Q16772 222 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 LRRC36Q1X8D7 754 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 ZNF720Q7Z2F6 126 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 ZCCHC9Q8N567 271 aaKnown RBP12.93□□□□□ -0.34
ERBB3-219ENST00000551242 CCDC89Q8N998 374 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 NCSTNQ92542 709 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 NGLY1Q96IV0 654 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 FNBP1Q96RU3 617 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 FIZ1Q96SL8 496 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 TMEM120AQ9BXJ8 343 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 FHDC1Q9C0D6 1143 aaPredicted RBP12.93□□□□□ -0.34
ERBB3-219ENST00000551242 PARVGQ9HBI0 331 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 CYP3A7-CYP3A51PA0A087WV96 503 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 ABHD2P08910 425 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 ETS1P14921 441 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 ANPEPP15144 967 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 GAP43P17677 238 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 CYP3A7P24462 503 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 MAN1A1P33908 653 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 DSG1Q02413 1049 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 LSAMPQ13449 338 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 MTM1Q13496 603 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 RASA3Q14644 834 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 SEPT7Q16181 437 aaKnown RBP12.93□□□□□ -0.34
ERBB3-219ENST00000551242 QRICH1Q2TAL8 776 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 MDH1BQ5I0G3 518 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 ANKS1BQ7Z6G8 1248 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 SLC25A41Q8N5S1 370 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 RPGRQ92834 1020 aaKnown RBP12.93□□□□□ -0.34
ERBB3-219ENST00000551242 KREMEN1Q96MU8 473 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 NAP1L4Q99733 375 aaKnown RBP12.93□□□□□ -0.34
ERBB3-219ENST00000551242 ECSITQ9BQ95 431 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 TRIM55Q9BYV6 548 aa12.93□□□□□ -0.34
ERBB3-219ENST00000551242 DDX43Q9NXZ2 648 aaKnown RBP12.93□□□□□ -0.34
ERBB3-219ENST00000551242 MYH14Q7Z406 1995 aaKnown RBP12.93□□□□□ -0.34
ERBB3-219ENST00000551242 MSH4O15457 936 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 LDHCP07864 332 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 CDK7P50613 346 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 USP46P62068 366 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 ODR4Q5SWX8 454 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.92□□□□□ -0.34
ERBB3-219ENST00000551242 SDCCAG8Q86SQ7 713 aaPredicted RBP12.92□□□□□ -0.34
ERBB3-219ENST00000551242 ANKMY2Q8IV38 441 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 ZBED8Q8IZ13 594 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 ARHGAP18Q8N392 663 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 ZNF276Q8N554 614 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 TCP10LQ8TDR4 215 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 EBF3Q9H4W6 596 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 KCNK13Q9HB14 408 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 UVRAGQ9P2Y5 699 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 ZNF652Q9Y2D9 606 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 LOC102724428A0A0B4J2F2 783 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 B2RBV5 119 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 H3BRJ5 948 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 MEIS2O14770 477 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 ZSCAN9O15535 394 aaPredicted RBP12.92□□□□□ -0.34
ERBB3-219ENST00000551242 HNRNPRO43390 633 aaKnown RBP12.92□□□□□ -0.34
ERBB3-219ENST00000551242 RARBP10826 455 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 SLC18A1P54219 525 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 SIK1P57059 783 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 CCDC62Q6P9F0 684 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 C1orf186Q6ZWK4 172 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 RELL1Q8IUW5 271 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 MBOAT7Q96N66 472 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 TTC25Q96NG3 672 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 HAPLN3Q96S86 360 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 CENPKQ9BS16 269 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 MANSC1Q9H8J5 431 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 RHBDL2Q9NX52 303 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 LARSQ9P2J5 1176 aaKnown RBP12.92□□□□□ -0.34
ERBB3-219ENST00000551242 F5H6K3 240 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 GOLGA8SH3BPF8 625 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 GOLGA8MH3BSY2 632 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 PIK3CDO00329 1044 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 OPHN1O60890 802 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 OR6B1O95007 311 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 FDX1P10109 184 aa12.92□□□□□ -0.34
ERBB3-219ENST00000551242 RFX1P22670 979 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms