RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 LAMA2P24043 3122 aaKnown RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 KIAA0100Q14667 2235 aaKnown RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 MATN2O00339 956 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 WDHD1O75717 1129 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 MAP2K2P36507 400 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 IL15P40933 162 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 KCNJ4P48050 445 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 STAT5BP51692 787 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 CHAF1AQ13111 956 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 PCOLCEQ15113 449 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 SHROOM1Q2M3G4 852 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 CDC42EP5Q6NZY7 148 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 FILIP1Q7Z7B0 1213 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 BCL6BQ8N143 479 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 KIAA1958Q8N8K9 716 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 FRAT1Q92837 279 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 DCPSQ96C86 337 aaKnown RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 EAF2Q96CJ1 260 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 FOXB1Q99853 325 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 TMX4Q9H1E5 349 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 PCIF1Q9H4Z3 704 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 DNAJC18Q9H819 358 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 ZBTB40Q9NUA8 1239 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 INTS7Q9NVH2 962 aaKnown RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 RNF186Q9NXI6 227 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 HMG20BQ9P0W2 317 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 ZFR2Q9UPR6 939 aaKnown RBP5.97□□□□□ -1.45
SCAF11-214ENST00000550893 LAMA4Q16363 1823 aa5.97□□□□□ -1.45
SCAF11-214ENST00000550893 LCTP09848 1927 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 C1QTNF3-AMACRE9PGA6 284 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 ARHGAP6O43182 974 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 MAFO75444 373 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-214ENST00000550893 PRLP01236 227 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 GNAI2P04899 355 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 GNAI3P08754 354 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 CR2P20023 1033 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 PTX3P26022 381 aaPredicted RBP5.96□□□□□ -1.46
SCAF11-214ENST00000550893 RGS3P49796 1198 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 MRE11P49959 708 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 FKBP1BP68106 108 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 ATP8B2P98198 1209 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 SLC6A3Q01959 620 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 NOGQ13253 232 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 NFYCQ13952 458 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 DLGAP5Q15398 846 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 ZNF174Q15697 407 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 TAF7LQ5H9L4 462 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 AGBL4Q5VU57 503 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 CREB3L3Q68CJ9 461 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 C16orf86Q6ZW13 317 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 USP30Q70CQ3 517 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 APOBEC3FQ8IUX4 373 aaKnown RBP5.96□□□□□ -1.46
SCAF11-214ENST00000550893 APPBP2Q92624 585 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 DPYSL5Q9BPU6 564 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 PIH1D3Q9NQM4 214 aaKnown RBP5.96□□□□□ -1.46
SCAF11-214ENST00000550893 OAZ3Q9UMX2 235 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 TSC22D4Q9Y3Q8 395 aa5.96□□□□□ -1.46
SCAF11-214ENST00000550893 MRPL42Q9Y6G3 142 aaKnown RBP5.96□□□□□ -1.46
SCAF11-214ENST00000550893 DDTLA6NHG4 134 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-214ENST00000550893 TCP10L2B9ZVM9 353 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 SMIM22K7EJ46 135 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 SLC5A1P13866 664 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 SLC9A1P19634 815 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 CTGFP29279 349 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 TM4SF4P48230 202 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 CTCFP49711 727 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-214ENST00000550893 MEOX1P50221 254 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 MMP14P50281 582 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 GRM1Q13255 1194 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 PRKG1Q13976 671 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 VGLL4Q14135 290 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 MVPQ14764 893 aaKnown RBP5.95□□□□□ -1.46
SCAF11-214ENST00000550893 JAZF1Q86VZ6 243 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 PALM2Q8IXS6 379 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 BRI3BPQ8WY22 251 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 CFHR4Q92496 578 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 E2F7Q96AV8 911 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 NSUN4Q96CB9 384 aaKnown RBP5.95□□□□□ -1.46
SCAF11-214ENST00000550893 C16orf92Q96LL3 132 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 ORAI3Q9BRQ5 295 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 MRIQ9BWK5 157 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 OR10A2Q9H208 303 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 C12orf65Q9H3J6 166 aaKnown RBP5.95□□□□□ -1.46
SCAF11-214ENST00000550893 ZNF112Q9UJU3 913 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 TCAF1Q9Y4C2 921 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 PPP2R3BQ9Y5P8 575 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 FPGT-TNNI3KV9GXZ4 949 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 MROH7-TTC4A0A0A0MT08 1334 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 SALL3Q9BXA9 1300 aa5.95□□□□□ -1.46
SCAF11-214ENST00000550893 UBA6A0AVT1 1052 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-214ENST00000550893 KPNA6O60684 536 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 CDC14BO60729 498 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 CYP17A1P05093 508 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 IFIT1P09914 478 aaKnown RBP5.94□□□□□ -1.46
SCAF11-214ENST00000550893 ATP2A2P16615 1042 aaKnown RBP5.94□□□□□ -1.46
SCAF11-214ENST00000550893 SELENOPP49908 381 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 NEK4P51957 841 aa5.94□□□□□ -1.46
SCAF11-214ENST00000550893 MECOMQ03112 1051 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms