RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 EPN3Q9H201 632 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 RPF1Q9H9Y2 349 aaKnown RBP9.51□□□□□ -0.89
TMEM116-209ENST00000550020 SPON1Q9HCB6 807 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 VTA1Q9NP79 307 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 RNF181Q9P0P0 153 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 BCCIPQ9P287 314 aaKnown RBP eCLIP9.51□□□□□ -0.89
TMEM116-209ENST00000550020 WDR35Q9P2L0 1181 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 CPSF3Q9UKF6 684 aaKnown RBP9.51□□□□□ -0.89
TMEM116-209ENST00000550020 PCDHGC3Q9UN70 934 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 FZD1Q9UP38 647 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 SLC45A1Q9Y2W3 748 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 NFS1Q9Y697 457 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 MYH10P35580 1976 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 COL11A1P12107 1806 aaPredicted RBP9.51□□□□□ -0.89
TMEM116-209ENST00000550020 MROH7Q68CQ1 1323 aa9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ATXN2Q99700 1313 aaKnown RBP9.51□□□□□ -0.89
TMEM116-209ENST00000550020 ADM5C9JUS6 153 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 INO80B-WBP1J3KQ70 363 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 TLR3O15455 904 aaKnown RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 RGS16O15492 202 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 STRNO43815 780 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 CNMDO75829 334 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 TJP3O95049 919 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 GH1P01241 217 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 PAEPP09466 180 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 MCF2P10911 925 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 HARSP12081 509 aaKnown RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 DESP17661 470 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 MMP8P22894 467 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 CDH5P33151 784 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 LSP1P33241 339 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 SSR1P43307 286 aaKnown RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 RPL21P46778 160 aaKnown RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 MARCKSL1P49006 195 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 LACTBP83111 547 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 CDC42EP1Q00587 391 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 KRT17Q04695 432 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 MAMLD1Q13495 774 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 TRADDQ15628 312 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 UAP1Q16222 522 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 FAM187BQ17R55 369 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 LY6KQ17RY6 165 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 DNAJC24Q6P3W2 148 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 DCUN1D2Q6PH85 259 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 MMS22LQ6ZRQ5 1243 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 ZNF467Q7Z7K2 595 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 ZBTB33Q86T24 672 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 NT5DC4Q86YG4 428 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 UBR7Q8N806 425 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 ZNF526Q8TF50 670 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 ZNF606Q8WXB4 792 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 CENPTQ96BT3 561 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 ZBTB45Q96K62 511 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 C11orf70Q9BRQ4 267 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 TRAIPQ9BWF2 469 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 INO80BQ9C086 356 aaPredicted RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 NEUROG2Q9H2A3 272 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 LHX5Q9H2C1 402 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 FZD8Q9H461 694 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 ASB7Q9H672 318 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 CYP3A43Q9HB55 503 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 ERVK-5Q9HDB9 667 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 GRHL1Q9NZI5 618 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 RBPJLQ9UBG7 517 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 ASIC3Q9UHC3 531 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 RRP15Q9Y3B9 282 aaKnown RBP9.5□□□□□ -0.89
TMEM116-209ENST00000550020 NR2E1Q9Y466 385 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 NUB1Q9Y5A7 615 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 WDR90Q96KV7 1748 aa9.5□□□□□ -0.89
TMEM116-209ENST00000550020 TMEM191CA6NGB0 347 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 PROZP22891 400 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 PTPN7P35236 360 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 GCLCP48506 637 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-209ENST00000550020 ATP1A2P50993 1020 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 SNX16P57768 344 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 MYL6P60660 151 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 TFAMQ00059 246 aaKnown RBP9.49□□□□□ -0.89
TMEM116-209ENST00000550020 ACAP1Q15027 740 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 PTGISQ16647 500 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 HADHQ16836 314 aaKnown RBP9.49□□□□□ -0.89
TMEM116-209ENST00000550020 ZNF667Q5HYK9 610 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 ZFYVE27Q5T4F4 411 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 WDR78Q5VTH9 848 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 LMBRD2Q68DH5 695 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-209ENST00000550020 SPOPLQ6IQ16 392 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 EFCAB12Q6NXP0 572 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 TTC27Q6P3X3 843 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 CCDC62Q6P9F0 684 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 DRICH1Q6PGQ1 229 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-209ENST00000550020 ZDHHC24Q6UX98 284 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 EEPD1Q7L9B9 569 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 SRLQ86TD4 932 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 ERICH1Q86X53 443 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 IFNLR1Q8IU57 520 aaPredicted RBP9.49□□□□□ -0.89
TMEM116-209ENST00000550020 RHPN2Q8IUC4 686 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 SH2D3CQ8N5H7 860 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 NIPA2Q8N8Q9 360 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 TTC13Q8NBP0 860 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 GPRC5AQ8NFJ5 357 aa9.49□□□□□ -0.89
TMEM116-209ENST00000550020 OR5B17Q8NGF7 314 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms