RNA–Protein interactions for RNA: ENST00000549328.1

CHMP1A-207, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-207ENST00000549328 USP37Q86T82 979 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 CCDC65Q8IXS2 484 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 TMEM130Q8N3G9 435 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 PRSS33Q8NF86 280 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 CYP4F11Q9HBI6 524 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 KBTBD4Q9NVX7 518 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 HCFC1R1Q9NWW0 138 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 TBC1D7Q9P0N9 293 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 FBXL21Q9UKT6 434 aa20.22■□□□□ 0.83
CHMP1A-207ENST00000549328 MYH15Q9Y2K3 1946 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 NARSO43776 548 aaKnown RBP20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 IL18RAPO95256 599 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 SEC24AO95486 1093 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 LDHAP00338 332 aaKnown RBP20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 NFICP08651 508 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 AMPD3Q01432 767 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 MTSS1LQ765P7 747 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 NT5DC4Q86YG4 428 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 IQUBQ8NA54 791 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 ITFG1Q8TB96 612 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 KCNG4Q8TDN1 519 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 IRF2BPLQ9H1B7 796 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 IKZF4Q9H2S9 585 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 INSL5Q9Y5Q6 135 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 NUMBLQ9Y6R0 609 aa20.21■□□□□ 0.83
CHMP1A-207ENST00000549328 OR6C75A6NL08 312 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 RHOP08100 348 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 CPB1P15086 417 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 GARTP22102 1010 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 CASP5P51878 434 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 ADCY1Q08828 1119 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 SHC4Q6S5L8 630 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 SYCP3Q8IZU3 236 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 SENP8Q96LD8 212 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 TMEM206Q9H813 350 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 GDE1Q9NZC3 331 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 MRPS23Q9Y3D9 190 aaKnown RBP20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 TIMM13Q9Y5L4 95 aaPredicted RBP20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 NOTCH4Q99466 2003 aa20.2■□□□□ 0.82
CHMP1A-207ENST00000549328 PPEF2O14830 753 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 ODC1P11926 461 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 TCF15Q12870 199 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 GPR17Q13304 367 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 FOXD4L5Q5VV16 416 aaPredicted RBP20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 OVOS1Q6IE37 1185 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 CNNM4Q6P4Q7 775 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 PARM1Q6UWI2 310 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 RNF19BQ6ZMZ0 732 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 STXBP4Q6ZWJ1 553 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 NPAS3Q8IXF0 933 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 SIX5Q8N196 739 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 TMEM105Q8N8V8 129 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 FOXD4L4Q8WXT5 416 aaPredicted RBP20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 FGF14Q92915 247 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 TRIM9Q9C026 710 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 SLC2A4RGQ9NR83 387 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 DPP3Q9NY33 737 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 CFAP45Q9UL16 551 aa20.19■□□□□ 0.82
CHMP1A-207ENST00000549328 ANK1P16157 1881 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 ZNF197O14709 1029 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 SPTLC1O15269 473 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 MICAL2O94851 1124 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 CYP11A1P05108 521 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 CFHP08603 1231 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 NPR3P17342 541 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 MYBPC2Q14324 1141 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 ELMOD1Q8N336 334 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 FAM213AQ9BRX8 229 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 DSEQ9UL01 958 aa20.18■□□□□ 0.82
CHMP1A-207ENST00000549328 CACNA1HO95180 2353 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 KIAA0391O15091 583 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 GALR2O43603 387 aaPredicted RBP20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 AOC1P19801 751 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 TAF6P49848 677 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 SLC5A9Q2M3M2 681 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 CWF19L1Q69YN2 538 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 IQCEQ6IPM2 695 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 BRSK2Q8IWQ3 736 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 EFCAB13Q8IY85 973 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 LEMD2Q8NC56 503 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 FLCNQ8NFG4 579 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 DHX58Q96C10 678 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 ZNF512Q96ME7 567 aaPredicted RBP20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 CORO1BQ9BR76 489 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 RPP25Q9BUL9 199 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 FGFBP2Q9BYJ0 223 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 MAGEF1Q9HAY2 307 aa20.17■□□□□ 0.82
CHMP1A-207ENST00000549328 KRBA1A5PL33 1030 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 PRPF6O94906 941 aaKnown RBP20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 ME1P48163 572 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 TWF1Q12792 350 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 FOXD4L6Q3SYB3 417 aaPredicted RBP20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 PRSS36Q5K4E3 855 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 CYP4A22Q5TCH4 519 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 ARMCX5Q6P1M9 558 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 FOXD4L3Q6VB84 417 aaPredicted RBP20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 GPR152Q8TDT2 470 aa20.16■□□□□ 0.82
CHMP1A-207ENST00000549328 C7orf25Q9BPX7 421 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms