RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-208ENST00000549205 ARID5BQ14865 1188 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 DRAP1Q14919 205 aaPredicted RBP13.13□□□□□ -0.31
ERBB3-208ENST00000549205 ZNF667Q5HYK9 610 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 OTOP2Q7RTS6 562 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 OR8K1Q8NGG5 319 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 KAT5Q92993 513 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 JAKMIP2Q96AA8 810 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 DDX27Q96GQ7 796 aaKnown RBP13.13□□□□□ -0.31
ERBB3-208ENST00000549205 ZNF560Q96MR9 790 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 SPAG5Q96R06 1193 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.13□□□□□ -0.317e-9■■■■□ 21
ERBB3-208ENST00000549205 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
ERBB3-208ENST00000549205 NUCKS1Q9H1E3 243 aaKnown RBP13.13□□□□□ -0.31
ERBB3-208ENST00000549205 NR2E3Q9Y5X4 410 aa13.13□□□□□ -0.31
ERBB3-208ENST00000549205 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 LRRC53A6NM62 1247 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 TBKBP1A7MCY6 615 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 F8VZ95 297 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 B4GALT3O60512 393 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 DGKIO75912 1065 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 DDHD2O94830 711 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 P4HA1P13674 534 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 ASPAP45381 313 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 TAF6P49848 677 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 CLCNKBP51801 687 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 UPP1Q16831 310 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 ARHGAP44Q17R89 818 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 WDR72Q3MJ13 1102 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 SV2CQ496J9 727 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 ZNF280BQ86YH2 543 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 SHC3Q92529 594 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 SYN2Q92777 582 aaPredicted RBP13.12□□□□□ -0.31
ERBB3-208ENST00000549205 ARID3AQ99856 593 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 BCO2Q9BYV7 579 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 GPR88Q9GZN0 384 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 ABHD10Q9NUJ1 306 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 CACNG4Q9UBN1 327 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 NXF1Q9UBU9 619 aaKnown RBP13.12□□□□□ -0.31
ERBB3-208ENST00000549205 POLIQ9UNA4 740 aa13.12□□□□□ -0.31
ERBB3-208ENST00000549205 MYO7AQ13402 2215 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 ZBBXA8MT70 800 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 SPTLC1O15269 473 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 HNRNPH3P31942 346 aaKnown RBP13.11□□□□□ -0.31
ERBB3-208ENST00000549205 SOX5P35711 763 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 STAT1P42224 750 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 LILRA4P59901 499 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 TNNC1P63316 161 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 TSR1Q2NL82 804 aaKnown RBP13.11□□□□□ -0.31
ERBB3-208ENST00000549205 SFMBT2Q5VUG0 894 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 E4F1Q66K89 784 aaPredicted RBP13.11□□□□□ -0.31
ERBB3-208ENST00000549205 SMYD5Q6GMV2 418 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 SCARA5Q6ZMJ2 495 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 FMNL3Q8IVF7 1028 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 COLGALT2Q8IYK4 626 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 LRRC43Q8N309 656 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 UBR7Q8N806 425 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 HERVK_113Q902F9 699 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 FAM193BQ96PV7 902 aaPredicted RBP13.11□□□□□ -0.31
ERBB3-208ENST00000549205 PAAF1Q9BRP4 392 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 FAM124BQ9H5Z6 455 aaPredicted RBP13.11□□□□□ -0.31
ERBB3-208ENST00000549205 CYP3A43Q9HB55 503 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 RC3H2Q9HBD1 1191 aaKnown RBP13.11□□□□□ -0.31
ERBB3-208ENST00000549205 GDAP2Q9NXN4 497 aa13.11□□□□□ -0.31
ERBB3-208ENST00000549205 KPNA7A9QM74 516 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 FOXN3O00409 490 aaPredicted RBP13.1□□□□□ -0.31
ERBB3-208ENST00000549205 ACO1P21399 889 aaKnown RBP13.1□□□□□ -0.31
ERBB3-208ENST00000549205 FECHP22830 423 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 PAX3P23760 479 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 YWHAEP62258 255 aaKnown RBP13.1□□□□□ -0.31
ERBB3-208ENST00000549205 ASIC2Q16515 512 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 MEA1Q16626 185 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 PAN2Q504Q3 1202 aaKnown RBP13.1□□□□□ -0.31
ERBB3-208ENST00000549205 WDR59Q6PJI9 974 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 DCLRE1AQ6PJP8 1040 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 TMCO2Q7Z6W1 182 aaPredicted RBP13.1□□□□□ -0.31
ERBB3-208ENST00000549205 LRRC8AQ8IWT6 810 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 FAM71AQ8IYT1 594 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 C3orf58Q8NDZ4 430 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 RABGGTAQ92696 567 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 ZNF689Q96CS4 500 aaPredicted RBP13.1□□□□□ -0.31
ERBB3-208ENST00000549205 SMYD3Q9H7B4 428 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 NRDE2Q9H7Z3 1164 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 ZNHIT6Q9NWK9 470 aaKnown RBP13.1□□□□□ -0.31
ERBB3-208ENST00000549205 AIPL1Q9NZN9 384 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 DNAJB4Q9UDY4 337 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 SNX9Q9Y5X1 595 aa13.1□□□□□ -0.31
ERBB3-208ENST00000549205 TMEM189-UBE2V1I3L0A0 370 aa13.09□□□□□ -0.31
ERBB3-208ENST00000549205 GFPT2O94808 682 aa13.09□□□□□ -0.31
ERBB3-208ENST00000549205 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
ERBB3-208ENST00000549205 PNMA6AP0CW24 399 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-208ENST00000549205 FERP16591 822 aa13.09□□□□□ -0.31
ERBB3-208ENST00000549205 IGFBP6P24592 240 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-208ENST00000549205 RAP1GAPP47736 663 aa13.09□□□□□ -0.31
ERBB3-208ENST00000549205 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
ERBB3-208ENST00000549205 FAM117BQ6P1L5 589 aa13.09□□□□□ -0.31
ERBB3-208ENST00000549205 LIMS2Q7Z4I7 341 aa13.09□□□□□ -0.31
ERBB3-208ENST00000549205 CMTR2Q8IYT2 770 aaKnown RBP13.09□□□□□ -0.31
ERBB3-208ENST00000549205 TTC39CQ8N584 583 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms