RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 USP37Q86T82 979 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 CCDC65Q8IXS2 484 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 TMEM130Q8N3G9 435 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 PRSS33Q8NF86 280 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 CYP4F11Q9HBI6 524 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 KBTBD4Q9NVX7 518 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 HCFC1R1Q9NWW0 138 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 TBC1D7Q9P0N9 293 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 FBXL21Q9UKT6 434 aa20.22■□□□□ 0.83
CHMP1A-203ENST00000547614 MYH15Q9Y2K3 1946 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 NARSO43776 548 aaKnown RBP20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 IL18RAPO95256 599 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 SEC24AO95486 1093 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 LDHAP00338 332 aaKnown RBP20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 NFICP08651 508 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 AMPD3Q01432 767 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 MTSS1LQ765P7 747 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 NT5DC4Q86YG4 428 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 IQUBQ8NA54 791 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 ITFG1Q8TB96 612 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 KCNG4Q8TDN1 519 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 IRF2BPLQ9H1B7 796 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 IKZF4Q9H2S9 585 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 INSL5Q9Y5Q6 135 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 NUMBLQ9Y6R0 609 aa20.21■□□□□ 0.83
CHMP1A-203ENST00000547614 OR6C75A6NL08 312 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 RHOP08100 348 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 CPB1P15086 417 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 GARTP22102 1010 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 CASP5P51878 434 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 ADCY1Q08828 1119 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 SHC4Q6S5L8 630 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 SYCP3Q8IZU3 236 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 SENP8Q96LD8 212 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 TMEM206Q9H813 350 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 GDE1Q9NZC3 331 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 MRPS23Q9Y3D9 190 aaKnown RBP20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 TIMM13Q9Y5L4 95 aaPredicted RBP20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 NOTCH4Q99466 2003 aa20.2■□□□□ 0.82
CHMP1A-203ENST00000547614 PPEF2O14830 753 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 ODC1P11926 461 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 TCF15Q12870 199 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 GPR17Q13304 367 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 FOXD4L5Q5VV16 416 aaPredicted RBP20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 OVOS1Q6IE37 1185 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 CNNM4Q6P4Q7 775 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 PARM1Q6UWI2 310 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 RNF19BQ6ZMZ0 732 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 STXBP4Q6ZWJ1 553 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 NPAS3Q8IXF0 933 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 SIX5Q8N196 739 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 TMEM105Q8N8V8 129 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 FOXD4L4Q8WXT5 416 aaPredicted RBP20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 FGF14Q92915 247 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 TRIM9Q9C026 710 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 SLC2A4RGQ9NR83 387 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 DPP3Q9NY33 737 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 CFAP45Q9UL16 551 aa20.19■□□□□ 0.82
CHMP1A-203ENST00000547614 ANK1P16157 1881 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 ZNF197O14709 1029 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 SPTLC1O15269 473 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 MICAL2O94851 1124 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 CYP11A1P05108 521 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 CFHP08603 1231 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 NPR3P17342 541 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 MYBPC2Q14324 1141 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 ELMOD1Q8N336 334 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 FAM213AQ9BRX8 229 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 DSEQ9UL01 958 aa20.18■□□□□ 0.82
CHMP1A-203ENST00000547614 CACNA1HO95180 2353 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 KIAA0391O15091 583 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 GALR2O43603 387 aaPredicted RBP20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 AOC1P19801 751 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 TAF6P49848 677 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 SLC5A9Q2M3M2 681 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 CWF19L1Q69YN2 538 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 IQCEQ6IPM2 695 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 BRSK2Q8IWQ3 736 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 EFCAB13Q8IY85 973 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 LEMD2Q8NC56 503 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 FLCNQ8NFG4 579 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 DHX58Q96C10 678 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 ZNF512Q96ME7 567 aaPredicted RBP20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 RTP3Q9BQQ7 232 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 CORO1BQ9BR76 489 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 RPP25Q9BUL9 199 aaKnown RBP20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 FGFBP2Q9BYJ0 223 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 MAGEF1Q9HAY2 307 aa20.17■□□□□ 0.82
CHMP1A-203ENST00000547614 KRBA1A5PL33 1030 aa20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 PRPF6O94906 941 aaKnown RBP20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 ME1P48163 572 aa20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 TWF1Q12792 350 aa20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 FOXD4L6Q3SYB3 417 aaPredicted RBP20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 PRSS36Q5K4E3 855 aa20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 CYP4A22Q5TCH4 519 aa20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 ARMCX5Q6P1M9 558 aa20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 FOXD4L3Q6VB84 417 aaPredicted RBP20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 GPR152Q8TDT2 470 aa20.16■□□□□ 0.82
CHMP1A-203ENST00000547614 C7orf25Q9BPX7 421 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms