RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 ISM1B1AKI9 464 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 TBC1D4O60343 1298 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 ERN1O75460 977 aaKnown RBP7.53□□□□□ -1.2
NPAS3-204ENST00000546849 CHEK2O96017 543 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 CKBP12277 381 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 MYF5P13349 255 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 NPR1P16066 1061 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 ZKSCAN1P17029 563 aaPredicted RBP7.53□□□□□ -1.2
NPAS3-204ENST00000546849 HDCP19113 662 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 SLC6A4P31645 630 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 APOBEC3AP31941 199 aaPredicted RBP7.53□□□□□ -1.2
NPAS3-204ENST00000546849 RABGGTBP53611 331 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 PIGFQ07326 219 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 EMC10Q5UCC4 262 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 TSHZ3Q63HK5 1081 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 SPTY2D1Q68D10 685 aaPredicted RBP7.53□□□□□ -1.2
NPAS3-204ENST00000546849 CYB5RLQ6IPT4 315 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 COL23A1Q86Y22 540 aaPredicted RBP7.53□□□□□ -1.2
NPAS3-204ENST00000546849 TTC9BQ8N6N2 239 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 NUP133Q8WUM0 1156 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 KBTBD7Q8WVZ9 684 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 SCAMP4Q969E2 229 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 APIPQ96GX9 242 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 CDK5RAP1Q96SZ6 601 aaKnown RBP7.53□□□□□ -1.2
NPAS3-204ENST00000546849 RNPEPQ9H4A4 650 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 AURKAIP1Q9NWT8 199 aaPredicted RBP7.53□□□□□ -1.2
NPAS3-204ENST00000546849 SMPD4Q9NXE4 827 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.53□□□□□ -1.2
NPAS3-204ENST00000546849 CORO2BQ9UQ03 480 aa7.53□□□□□ -1.2
NPAS3-204ENST00000546849 USP15Q9Y4E8 981 aaPredicted RBP7.53□□□□□ -1.2
NPAS3-204ENST00000546849 ADAMTS20P59510 1910 aa7.52□□□□□ -1.2
NPAS3-204ENST00000546849 DIRC3C9JPN6 131 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 M0QYG6 137 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 FOXN3O00409 490 aaPredicted RBP7.52□□□□□ -1.21
NPAS3-204ENST00000546849 SCAF4O95104 1147 aaKnown RBP7.52□□□□□ -1.21
NPAS3-204ENST00000546849 RPL17P18621 184 aaKnown RBP7.52□□□□□ -1.21
NPAS3-204ENST00000546849 SCNN1GP51170 649 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 RNASE9P60153 205 aaKnown RBP7.52□□□□□ -1.21
NPAS3-204ENST00000546849 ZNF844Q08AG5 666 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 LONRF1Q17RB8 773 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 PALM2Q8IXS6 379 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 ACRBPQ8NEB7 543 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 CPT1CQ8TCG5 803 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 MRGPRX1Q96LB2 322 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 PNKPQ96T60 521 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 P2RX7Q99572 595 aaKnown RBP7.52□□□□□ -1.21
NPAS3-204ENST00000546849 CNPPD1Q9BV87 410 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 BTBD1Q9H0C5 482 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 ATP6V0A4Q9HBG4 840 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 PNPLA8Q9NP80 782 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 SACM1LQ9NTJ5 587 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 SLC52A1Q9NWF4 448 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 TRPM5Q9NZQ8 1165 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 RNF181Q9P0P0 153 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 SLC45A2Q9UMX9 530 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 PAXBP1Q9Y5B6 917 aa7.52□□□□□ -1.21
NPAS3-204ENST00000546849 KLRG2A4D1S0 409 aaPredicted RBP7.51□□□□□ -1.21
NPAS3-204ENST00000546849 TRIM24O15164 1050 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 PEX14O75381 377 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 UNC5CO95185 931 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 SUMO3P55854 103 aaPredicted RBP7.51□□□□□ -1.21
NPAS3-204ENST00000546849 RHBDL3P58872 404 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 SATB1Q01826 763 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 BIRC2Q13490 618 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 RRP1BQ14684 758 aaKnown RBP7.51□□□□□ -1.21
NPAS3-204ENST00000546849 CNGA2Q16280 664 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 AMOTQ4VCS5 1084 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 LMBRD2Q68DH5 695 aaPredicted RBP7.51□□□□□ -1.21
NPAS3-204ENST00000546849 NAIF1Q69YI7 327 aaPredicted RBP7.51□□□□□ -1.21
NPAS3-204ENST00000546849 KRT78Q8N1N4 520 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 MPP5Q8N3R9 675 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 SVIPQ8NHG7 77 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 PARD3BQ8TEW8 1205 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 ANKS1AQ92625 1134 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 C8orf49Q96NF6 230 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 SMOQ99835 787 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 TINAGL1Q9GZM7 467 aaPredicted RBP7.51□□□□□ -1.21
NPAS3-204ENST00000546849 KLC2Q9H0B6 622 aa7.51□□□□□ -1.21
NPAS3-204ENST00000546849 AFF4Q9UHB7 1163 aaKnown RBP7.51□□□□□ -1.21
NPAS3-204ENST00000546849 MTO1Q9Y2Z2 717 aaKnown RBP7.51□□□□□ -1.21
NPAS3-204ENST00000546849 LEFTY2O00292 366 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 GRPP07492 148 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 EN2P19622 333 aaPredicted RBP7.5□□□□□ -1.21
NPAS3-204ENST00000546849 GCSHP23434 173 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 ACRV1P26436 265 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 AK2P54819 239 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 POU6F2P78424 691 aaPredicted RBP7.5□□□□□ -1.21
NPAS3-204ENST00000546849 SLC13A2Q13183 592 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 RAB32Q13637 225 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 NOMO2Q5JPE7 1267 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 Q6ZSN1 163 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 RHOT2Q8IXI1 618 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 TMIEQ8NEW7 156 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 OR56A1Q8NGH5 318 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 KLHL32Q96NJ5 620 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 TBCBQ99426 244 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 MYD88Q99836 296 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 ELAC2Q9BQ52 826 aaKnown RBP7.5□□□□□ -1.21
NPAS3-204ENST00000546849 TRIM54Q9BYV2 358 aa7.5□□□□□ -1.21
NPAS3-204ENST00000546849 ZNF700Q9H0M5 742 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms