RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 PPP1R35Q8TAP8 253 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 BRIX1Q8TDN6 353 aaKnown RBP2.98□□□□□ -1.93
YBX3-214ENST00000544501 MARS2Q96GW9 593 aaKnown RBP2.98□□□□□ -1.93
YBX3-214ENST00000544501 BOD1Q96IK1 185 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 KLHL32Q96NJ5 620 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 VPS11Q9H270 941 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 SARS2Q9NP81 518 aaKnown RBP2.98□□□□□ -1.93
YBX3-214ENST00000544501 CNNM1Q9NRU3 951 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 TMEM74BQ9NUR3 256 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 OBP2AQ9NY56 170 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 RNF181Q9P0P0 153 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 DKK2Q9UBU2 259 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 L1RE1Q9UN81 338 aa2.98□□□□□ -1.93
YBX3-214ENST00000544501 CAPN8A6NHC0 703 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 E7ENX8 843 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 PHGDHO43175 533 aaKnown RBP2.97□□□□□ -1.93
YBX3-214ENST00000544501 FRS3O43559 492 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 MARCH6O60337 910 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 NCR1O76036 304 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 GPANK1O95872 356 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 ZBED1O96006 694 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 GNAI2P04899 355 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 ELANEP08246 267 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 MAKP20794 623 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 FGFR4P22455 802 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 NR4A1P22736 598 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 DDX6P26196 483 aaKnown RBP eCLIP2.97□□□□□ -1.93
YBX3-214ENST00000544501 CACNB3P54284 484 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 TAP2Q03519 686 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 PIGFQ07326 219 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 ZNF844Q08AG5 666 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 HABP2Q14520 560 aaPredicted RBP2.97□□□□□ -1.93
YBX3-214ENST00000544501 TIGD2Q4W5G0 525 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 KHDC1LQ5JSQ8 128 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 CCDC181Q5TID7 509 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 FNDC7Q5VTL7 733 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 B3GNTL1Q67FW5 361 aaPredicted RBP2.97□□□□□ -1.93
YBX3-214ENST00000544501 NPNTQ6UXI9 565 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 MAEAQ7L5Y9 396 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 ARHGEF19Q8IW93 802 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 SH2D3CQ8N5H7 860 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 TMIEQ8NEW7 156 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 ZNF483Q8TF39 744 aaPredicted RBP2.97□□□□□ -1.93
YBX3-214ENST00000544501 TNPO1Q92973 898 aaKnown RBP2.97□□□□□ -1.93
YBX3-214ENST00000544501 FUBP1Q96AE4 644 aaKnown RBP2.97□□□□□ -1.93
YBX3-214ENST00000544501 TTC17Q96AE7 1141 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 CCDC136Q96JN2 1154 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 C1orf43Q9BWL3 253 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 B3GNT5Q9BYG0 378 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 ZNF768Q9H5H4 540 aaKnown RBP2.97□□□□□ -1.93
YBX3-214ENST00000544501 RSAD1Q9HA92 442 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 ST6GALNAC1Q9NSC7 600 aaPredicted RBP2.97□□□□□ -1.93
YBX3-214ENST00000544501 PIH1D1Q9NWS0 290 aaKnown RBP2.97□□□□□ -1.93
YBX3-214ENST00000544501 GPRC5BQ9NZH0 403 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 PCDHA1Q9Y5I3 950 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 HS3ST4Q9Y661 456 aa2.97□□□□□ -1.93
YBX3-214ENST00000544501 FRMPD2Q68DX3 1309 aaPredicted RBP2.96□□□□□ -1.93
YBX3-214ENST00000544501 CCDC195A0A1B0GUA6 201 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 A0A1W2PPL8 197 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 A0A1W2PS29 197 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 NARSO43776 548 aaKnown RBP2.96□□□□□ -1.94
YBX3-214ENST00000544501 FZD7O75084 574 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 ERN1O75460 977 aaKnown RBP2.96□□□□□ -1.94
YBX3-214ENST00000544501 SOAT2O75908 522 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 CDKL5O76039 1030 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 NDUFA10O95299 355 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 FOSP01100 380 aaPredicted RBP2.96□□□□□ -1.94
YBX3-214ENST00000544501 AHSGP02765 367 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 THP07101 528 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 FCER1AP12319 257 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 TACR2P21452 398 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 ZFP36P26651 326 aaKnown RBP2.96□□□□□ -1.94
YBX3-214ENST00000544501 MCM7P33993 719 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 USP14P54578 494 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 SOX8P57073 446 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 PSMC1P62191 440 aaKnown RBP2.96□□□□□ -1.94
YBX3-214ENST00000544501 CXADRP78310 365 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 FAM193AP78312 1265 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 BLOC1S1P78537 153 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 HSD11B2P80365 405 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 DGCR2P98153 550 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 TAP1Q03518 808 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 PUM1Q14671 1186 aaKnown RBP eCLIP2.96□□□□□ -1.948e-7■□□□□ 9.7
YBX3-214ENST00000544501 GRM3Q14832 879 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 LY6G5CQ5SRR4 150 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 SP5Q6BEB4 398 aaPredicted RBP2.96□□□□□ -1.94
YBX3-214ENST00000544501 CYB5RLQ6IPT4 315 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 DARS2Q6PI48 645 aaKnown RBP2.96□□□□□ -1.94
YBX3-214ENST00000544501 USP51Q70EK9 711 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 MRGPREQ86SM8 312 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 CFAP52Q8N1V2 620 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 Q8NA96 180 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 PDPRQ8NCN5 879 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 SLC17A8Q8NDX2 589 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 CPEB3Q8NE35 698 aaKnown RBP2.96□□□□□ -1.94
YBX3-214ENST00000544501 KBTBD7Q8WVZ9 684 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 MRGPRX1Q96LB2 322 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 CNPPD1Q9BV87 410 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 TLR10Q9BXR5 811 aa2.96□□□□□ -1.94
YBX3-214ENST00000544501 TEX101Q9BY14 249 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms