RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 COLGALT2Q8IYK4 626 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 ZNF397Q8NF99 534 aaPredicted RBP17.22■□□□□ 0.35
TRIM65-204ENST00000543309 PPP1R9BQ96SB3 815 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 PI4K2AQ9BTU6 479 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 NIF3L1Q9GZT8 377 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 NUCKS1Q9H1E3 243 aaKnown RBP17.22■□□□□ 0.35
TRIM65-204ENST00000543309 GOLGA2P5Q9HBQ8 144 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 TBKBP1A7MCY6 615 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 TMEM189-UBE2V1I3L0A0 370 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 PODXLO00592 558 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 LRRN2O75325 713 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 UPP2O95045 317 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 TAF6P49848 677 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 MFAP3P55082 362 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 GSDMDP57764 484 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 POLR2FP61218 127 aaKnown RBP17.21■□□□□ 0.35
TRIM65-204ENST00000543309 ZBED6P86452 979 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 ARID5BQ14865 1188 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 SV2CQ496J9 727 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 CACNA2D4Q7Z3S7 1137 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 CNGA4Q8IV77 575 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 ARHGEF19Q8IW93 802 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 CMTR2Q8IYT2 770 aaKnown RBP17.21■□□□□ 0.35
TRIM65-204ENST00000543309 FAM193BQ96PV7 902 aaPredicted RBP17.21■□□□□ 0.35
TRIM65-204ENST00000543309 CDX2Q99626 313 aaPredicted RBP17.21■□□□□ 0.35
TRIM65-204ENST00000543309 TMEM175Q9BSA9 504 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 COL25A1Q9BXS0 654 aaPredicted RBP17.21■□□□□ 0.35
TRIM65-204ENST00000543309 STK33Q9BYT3 514 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 APOBEC3GQ9HC16 384 aaKnown RBP17.21■□□□□ 0.35
TRIM65-204ENST00000543309 GDAP2Q9NXN4 497 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 LUC7L2Q9Y383 392 aaKnown RBP17.21■□□□□ 0.35
TRIM65-204ENST00000543309 NUB1Q9Y5A7 615 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 FHOD1Q9Y613 1164 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 SLC4A7Q9Y6M7 1214 aa17.21■□□□□ 0.35
TRIM65-204ENST00000543309 PPEF2O14830 753 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 DDHD2O94830 711 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 GJB5O95377 273 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 CASP14P31944 242 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 GATMP50440 423 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 CLCNKBP51801 687 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 JAM2P57087 298 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 LILRA4P59901 499 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 HTRA4P83105 476 aaPredicted RBP17.2■□□□□ 0.34
TRIM65-204ENST00000543309 APBA1Q02410 837 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 CUL2Q13617 745 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 WDR72Q3MJ13 1102 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 SCARA3Q6AZY7 606 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 IQCEQ6IPM2 695 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 DCLRE1AQ6PJP8 1040 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 ZNF280BQ86YH2 543 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 PPM1KQ8N3J5 372 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 SPC24Q8NBT2 197 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 BAP1Q92560 729 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 TATDN2Q93075 761 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 BCO2Q9BYV7 579 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 UBE2TQ9NPD8 197 aaPredicted RBP17.2■□□□□ 0.34
TRIM65-204ENST00000543309 CXXC1Q9P0U4 656 aaPredicted RBP17.2■□□□□ 0.34
TRIM65-204ENST00000543309 DNAJC12Q9UKB3 198 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 SCN1AP35498 2009 aa17.2■□□□□ 0.34
TRIM65-204ENST00000543309 CASTOR2A6NHX0 329 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 KPNA7A9QM74 516 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 AKR1B15C9JRZ8 316 aaPredicted RBP17.19■□□□□ 0.34
TRIM65-204ENST00000543309 MFAP3LO75121 409 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 ASPAP45381 313 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 AARSP49588 968 aaKnown RBP eCLIP17.19■□□□□ 0.342e-6■■■□□ 17.5
TRIM65-204ENST00000543309 YWHAEP62258 255 aaKnown RBP17.19■□□□□ 0.34
TRIM65-204ENST00000543309 TNNC1P63316 161 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 LRMPQ12912 555 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 SPOPLQ6IQ16 392 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 TTC39CQ8N584 583 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 SYN2Q92777 582 aaPredicted RBP17.19■□□□□ 0.34
TRIM65-204ENST00000543309 DNAJC7Q99615 494 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 TTYH1Q9H313 450 aaPredicted RBP17.19■□□□□ 0.34
TRIM65-204ENST00000543309 NRDE2Q9H7Z3 1164 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 CYP3A43Q9HB55 503 aa17.19■□□□□ 0.34
TRIM65-204ENST00000543309 TMEM265A0A087WTH1 108 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 F8VZ95 297 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 B4GALT3O60512 393 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 FAM163BP0C2L3 166 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 ATP2A2P16615 1042 aaKnown RBP17.18■□□□□ 0.34
TRIM65-204ENST00000543309 GJB7Q6PEY0 223 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 RRAGAQ7L523 313 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 DPH6Q7L8W6 267 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 LIMS2Q7Z4I7 341 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 HERC6Q8IVU3 1022 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 TMEM130Q8N3G9 435 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 MAFAQ8NHW3 353 aaPredicted RBP17.18■□□□□ 0.34
TRIM65-204ENST00000543309 SHC3Q92529 594 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 RNPC3Q96LT9 517 aaKnown RBP17.18■□□□□ 0.34
TRIM65-204ENST00000543309 KREMEN1Q96MU8 473 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 SPAG5Q96R06 1193 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 YME1L1Q96TA2 773 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 NLRC4Q9NPP4 1024 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 INSL6Q9Y581 213 aa17.18■□□□□ 0.34
TRIM65-204ENST00000543309 ARHGEF37A1IGU5 675 aa17.17■□□□□ 0.34
TRIM65-204ENST00000543309 RNF225M0QZC1 329 aaPredicted RBP17.17■□□□□ 0.34
TRIM65-204ENST00000543309 SPTLC1O15269 473 aa17.17■□□□□ 0.34
TRIM65-204ENST00000543309 B3GAT3O94766 335 aa17.17■□□□□ 0.34
TRIM65-204ENST00000543309 CLSTN1O94985 981 aa17.17■□□□□ 0.34
TRIM65-204ENST00000543309 HNRNPH3P31942 346 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms