RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 WDR27A2RRH5 827 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 LOC730098B7Z3J9 87 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 TNFRSF10AO00220 468 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 PDXKO00764 312 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 KIAA0391O15091 583 aaKnown RBP10.52□□□□□ -0.73
YBX3-212ENST00000542002 PRPF40AO75400 957 aaKnown RBP10.52□□□□□ -0.73
YBX3-212ENST00000542002 ABLIM3O94929 683 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 SEC24AO95486 1093 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 C1RP00736 705 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 CST3P01034 146 aaPredicted RBP10.52□□□□□ -0.73
YBX3-212ENST00000542002 ITGB3P05106 788 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 SRGAP2BP0DMP2 458 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 BMP6P22004 513 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 CDR1P51861 262 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 ITIH3Q06033 890 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 CYP24A1Q07973 514 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 ISM2Q6H9L7 571 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 SLC8B1Q6J4K2 584 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 ANKS3Q6ZW76 656 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 HS2ST1Q7LGA3 356 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 GPR149Q86SP6 731 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 NT5DC4Q86YG4 428 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 CSGALNACT2Q8N6G5 542 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 XXYLT1Q8NBI6 393 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 CCDC127Q96BQ5 260 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 RPGRIP1Q96KN7 1286 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 TMEM209Q96SK2 561 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 RTP3Q9BQQ7 232 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 PHF7Q9BWX1 381 aaPredicted RBP10.52□□□□□ -0.73
YBX3-212ENST00000542002 MTMR12Q9C0I1 747 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 SFXN1Q9H9B4 322 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 INTS13Q9NVM9 706 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 DZANK1Q9NVP4 752 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 PRKAG3Q9UGI9 489 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 FBXW11Q9UKB1 542 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 AGAP1Q9UPQ3 857 aa10.52□□□□□ -0.73
YBX3-212ENST00000542002 CYB561D2O14569 222 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 XPOTO43592 962 aaKnown RBP10.51□□□□□ -0.73
YBX3-212ENST00000542002 N4BP1O75113 896 aaKnown RBP10.51□□□□□ -0.73
YBX3-212ENST00000542002 NR3C1P04150 777 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 OR4Q2P0C623 313 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 SP100P23497 879 aaPredicted RBP10.51□□□□□ -0.73
YBX3-212ENST00000542002 POLR2BP30876 1174 aaKnown RBP10.51□□□□□ -0.73
YBX3-212ENST00000542002 PRCPP42785 496 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 ARPP19P56211 112 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 DLG4P78352 724 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 ROR1Q01973 937 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 CREMQ03060 361 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 PSMD6Q15008 389 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 CTXN3Q4LDR2 81 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 ZCWPW2Q504Y3 356 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 ATAT1Q5SQI0 421 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 C1orf220Q5T0J3 134 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 WSCD1Q658N2 575 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 PDXDC1Q6P996 788 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 DSTYKQ6XUX3 929 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 RNF19BQ6ZMZ0 732 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 SLC9A9Q8IVB4 645 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 ELOA2Q8IYF1 753 aaPredicted RBP10.51□□□□□ -0.73
YBX3-212ENST00000542002 GUF1Q8N442 669 aaKnown RBP10.51□□□□□ -0.73
YBX3-212ENST00000542002 APPL2Q8NEU8 664 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 CMASQ8NFW8 434 aaPredicted RBP10.51□□□□□ -0.73
YBX3-212ENST00000542002 ZNF461Q8TAF7 563 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 HDAC7Q8WUI4 952 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 EEF2KMTQ96G04 330 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 PLEKHA4Q9H4M7 779 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 CGNQ9P2M7 1197 aaKnown RBP10.51□□□□□ -0.73
YBX3-212ENST00000542002 TRAF3IP3Q9Y228 551 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 FAM50BQ9Y247 325 aa10.51□□□□□ -0.73
YBX3-212ENST00000542002 VWA8A3KMH1 1905 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 KPNA7A9QM74 516 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 H7C4K7 107 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 EXOC3O60645 756 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 ZMYND10O75800 440 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 CYP11A1P05108 521 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 DLATP10515 647 aaKnown RBP10.5□□□□□ -0.73
YBX3-212ENST00000542002 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
YBX3-212ENST00000542002 TYMPP19971 482 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 SSTR3P32745 418 aaPredicted RBP10.5□□□□□ -0.73
YBX3-212ENST00000542002 TAF6P49848 677 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 PMS1P54277 932 aaKnown RBP10.5□□□□□ -0.73
YBX3-212ENST00000542002 CLDN10P78369 228 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 YWHAHQ04917 246 aaPredicted RBP10.5□□□□□ -0.73
YBX3-212ENST00000542002 DUOXA2Q1HG44 320 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 CES5AQ6NT32 575 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 C15orf39Q6ZRI6 1047 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 CLEC17AQ6ZS10 378 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 TRAPPC11Q7Z392 1133 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 LRRTM3Q86VH5 581 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 OR10T2Q8NGX3 314 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 PARD3BQ8TEW8 1205 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 CACTINQ8WUQ7 758 aaKnown RBP10.5□□□□□ -0.73
YBX3-212ENST00000542002 ELMO3Q96BJ8 720 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 GSDMAQ96QA5 445 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 PRKD2Q9BZL6 878 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 CRISPLD1Q9H336 500 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 EPHX3Q9H6B9 360 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 MAN1B1Q9UKM7 699 aa10.5□□□□□ -0.73
YBX3-212ENST00000542002 ITGA11Q9UKX5 1188 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms