RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 ODC1P11926 461 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 TYMPP19971 482 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 POLR2BP30876 1174 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 SMC1AQ14683 1233 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 MAN2A1Q16706 1144 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 TIGD5Q53EQ6 642 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 WDR44Q5JSH3 913 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 DSTYKQ6XUX3 929 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 C15orf39Q6ZRI6 1047 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 C11orf57Q6ZUT1 292 aaPredicted RBP18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 ANKS3Q6ZW76 656 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 TMC7Q7Z402 723 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 METTL23Q86XA0 190 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 TMEM86AQ8N2M4 240 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 OR5B17Q8NGF7 314 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 POF1BQ8WVV4 589 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 MRPL38Q96DV4 380 aaKnown RBP18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 HPDLQ96IR7 371 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 TTPALQ9BTX7 342 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 GOLGA2P5Q9HBQ8 144 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 DPP7Q9UHL4 492 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 MTUS1Q9ULD2 1270 aa18.85■□□□□ 0.61
CLSTN3-210ENST00000540931 GTPBP10A4D1E9 387 aaKnown RBP18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 KCNJ18B7U540 433 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 NT5C1B-RDH14C9J2C7 533 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 HUS1O60921 280 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 CTSAP10619 480 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 GLUD2P49448 558 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 NCOA4Q13772 614 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 ADGRE1Q14246 886 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 KCNJ12Q14500 433 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 TCP11X2Q5H9J9 407 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 ELMSAN1Q6PJG2 1045 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 CREBRFQ8IUR6 639 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 RNF168Q8IYW5 571 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 VPS52Q8N1B4 723 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 MICAL1Q8TDZ2 1067 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 PPM1EQ8WY54 764 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 EEF2KMTQ96G04 330 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 ASB2Q96Q27 587 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 POP1Q99575 1024 aaKnown RBP18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 CDCA3Q99618 268 aaPredicted RBP18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 EMILIN2Q9BXX0 1053 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 CXCL16Q9H2A7 254 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 CHST7Q9NS84 486 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 MARCH5Q9NX47 278 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 PCDHB8Q9UN66 801 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 COQ4Q9Y3A0 265 aa18.84■□□□□ 0.61
CLSTN3-210ENST00000540931 EFEMP2O95967 443 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 PIK3CAP42336 1068 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 GCLMP48507 274 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 FMO5P49326 533 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 TNNC1P63316 161 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 DLG4P78352 724 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 DSG1Q02413 1049 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 KCNH2Q12809 1159 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 ZNF667Q5HYK9 610 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 FAM171A1Q5VUB5 890 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 CDKAL1Q5VV42 579 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 TDRD10Q5VZ19 366 aaKnown RBP18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 PPFIBP1Q86W92 1011 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 TOP6BLQ8N6T0 577 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 MED15Q96RN5 788 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 TUBGCP2Q9BSJ2 902 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 ENTPD7Q9NQZ7 604 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 FNIP2Q9P278 1114 aa18.83■□□□□ 0.6
CLSTN3-210ENST00000540931 BDP1A6H8Y1 2624 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 KIAA1671Q9BY89 1806 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 LRRC10BA6NIK2 292 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 B4GALT3O60512 393 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 CYP11A1P05108 521 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 FGFR3P22607 806 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 PBX3P40426 434 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 LHX1P48742 406 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 WNT7BP56706 349 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 ZNF699Q32M78 642 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 FILIP1LQ4L180 1135 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 LMBRD2Q68DH5 695 aaPredicted RBP18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 THEM5Q8N1Q8 247 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 AOPEPQ8N6M6 819 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 PLEKHO2Q8TD55 490 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 PIK3R5Q8WYR1 880 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 ZNF516Q92618 1163 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 PAAF1Q9BRP4 392 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 GZF1Q9H116 711 aaPredicted RBP18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 ZBP1Q9H171 429 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 CERS4Q9HA82 394 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 ALG13Q9NP73 1137 aaKnown RBP18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 FANCLQ9NW38 375 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 RAB20Q9NX57 234 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 THEGQ9P2T0 379 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 HCSTQ9UBK5 93 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 SIX4Q9UIU6 781 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 MAFFQ9ULX9 164 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 DAAM1Q9Y4D1 1078 aa18.82■□□□□ 0.6
CLSTN3-210ENST00000540931 ARHGEF15O94989 841 aa18.81■□□□□ 0.6
CLSTN3-210ENST00000540931 TRIM49P0CI25 452 aa18.81■□□□□ 0.6
CLSTN3-210ENST00000540931 TRIM49CP0CI26 452 aa18.81■□□□□ 0.6
CLSTN3-210ENST00000540931 YWHAEP62258 255 aaKnown RBP18.81■□□□□ 0.6
CLSTN3-210ENST00000540931 MYL7Q01449 175 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms