RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 DHX34Q14147 1143 aaKnown RBP14.85□□□□□ -0.03
USP3-204ENST00000540797 PBXIP1Q96AQ6 731 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 OSMRQ99650 979 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 MTMR12Q9C0I1 747 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 FAM198AQ9UFP1 575 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 RICTORQ6R327 1708 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 ESRRBO95718 433 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 ART3Q13508 389 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 GRIK4Q16099 956 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 CHSY1Q86X52 802 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 AGAP3Q96P47 875 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 MRIQ9BWK5 157 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 XPNPEP3Q9NQH7 507 aa14.85□□□□□ -0.03
USP3-204ENST00000540797 AFF4Q9UHB7 1163 aaKnown RBP14.85□□□□□ -0.03
USP3-204ENST00000540797 CTIFO43310 598 aaKnown RBP14.84□□□□□ -0.03
USP3-204ENST00000540797 GARTP22102 1010 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 PKN1Q16512 942 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 DEFB128Q7Z7B8 93 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 DCUN1D1Q96GG9 259 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 TRIM54Q9BYV2 358 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 TSR3Q9UJK0 312 aaKnown RBP14.84□□□□□ -0.03
USP3-204ENST00000540797 GNGT2O14610 69 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 SESN2P58004 480 aaPredicted RBP14.84□□□□□ -0.03
USP3-204ENST00000540797 RASGRP2Q7LDG7 609 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 PPHLN1Q8NEY8 458 aaKnown RBP14.84□□□□□ -0.03
USP3-204ENST00000540797 UBE2Q2Q8WVN8 375 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 DRC3Q9H069 523 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 CATSPERBQ9H7T0 1116 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 TOB1P50616 345 aaPredicted RBP14.84□□□□□ -0.03
USP3-204ENST00000540797 SESN3P58005 492 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 LAMTOR4Q0VGL1 99 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 KIF19Q2TAC6 998 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 TLK2Q86UE8 772 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 GTSE1Q9NYZ3 720 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 SUN2Q9UH99 717 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.84□□□□□ -0.03
USP3-204ENST00000540797 ASMTLO95671 621 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 HABP4Q5JVS0 413 aaKnown RBP14.84□□□□□ -0.03
USP3-204ENST00000540797 GJB7Q6PEY0 223 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 CCNYL1Q8N7R7 359 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 SNX19Q92543 992 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 ENTPD7Q9NQZ7 604 aa14.84□□□□□ -0.03
USP3-204ENST00000540797 WTIPA6NIX2 430 aaPredicted RBP14.83□□□□□ -0.03
USP3-204ENST00000540797 USP27XA6NNY8 438 aa14.83□□□□□ -0.03
USP3-204ENST00000540797 THP07101 528 aa14.83□□□□□ -0.03
USP3-204ENST00000540797 KLK7P49862 253 aa14.83□□□□□ -0.03
USP3-204ENST00000540797 NTRK3Q16288 839 aa14.83□□□□□ -0.03
USP3-204ENST00000540797 WDR75Q8IWA0 830 aaKnown RBP14.83□□□□□ -0.03
USP3-204ENST00000540797 METTL5Q9NRN9 209 aaKnown RBP14.83□□□□□ -0.03
USP3-204ENST00000540797 GAKO14976 1311 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 CYB561D2O14569 222 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 PSMD3O43242 534 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.04
USP3-204ENST00000540797 AP1G2O75843 785 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 CNTN2Q02246 1040 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 EPM2AIP1Q7L775 607 aaPredicted RBP14.83□□□□□ -0.04
USP3-204ENST00000540797 CBWD1Q9BRT8 395 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 TAF1DQ9H5J8 278 aaPredicted RBP14.83□□□□□ -0.04
USP3-204ENST00000540797 DBR1Q9UK59 544 aaKnown RBP14.83□□□□□ -0.04
USP3-204ENST00000540797 PPME1Q9Y570 386 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 SALL3Q9BXA9 1300 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 A0A1W2PQJ5 194 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 AP3B1O00203 1094 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 INHBEP58166 350 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 NUGGCQ68CJ6 796 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 ANGPTL8Q6UXH0 198 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 PPWD1Q96BP3 646 aaKnown RBP14.83□□□□□ -0.04
USP3-204ENST00000540797 HMX1Q9NP08 348 aaPredicted RBP14.83□□□□□ -0.04
USP3-204ENST00000540797 AMACRQ9UHK6 382 aa14.83□□□□□ -0.04
USP3-204ENST00000540797 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.83□□□□□ -0.04
USP3-204ENST00000540797 ACVR2BQ13705 512 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 IMPG1Q17R60 797 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 CYP4A22Q5TCH4 519 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.82□□□□□ -0.04
USP3-204ENST00000540797 SLC13A4Q9UKG4 626 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 URODP06132 367 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 MFSD10Q14728 455 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 HIF1AQ16665 826 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 RNF135Q8IUD6 432 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 C1orf131Q8NDD1 294 aaKnown RBP14.82□□□□□ -0.04
USP3-204ENST00000540797 RNF217Q8TC41 542 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 DNAJB3Q8WWF6 145 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 TUBB6Q9BUF5 446 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 ATMINO43313 823 aaPredicted RBP14.82□□□□□ -0.04
USP3-204ENST00000540797 THEMIS2Q5TEJ8 643 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 GSPT2Q8IYD1 628 aaKnown RBP14.82□□□□□ -0.04
USP3-204ENST00000540797 CGRRF1Q99675 332 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 CFLARO15519 480 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 TMEM253P0C7T8 217 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 ACO1P21399 889 aaKnown RBP14.82□□□□□ -0.04
USP3-204ENST00000540797 CTXN3Q4LDR2 81 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 Q9H521 79 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 RAG1P15918 1043 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 TYK2P29597 1187 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 SDE2Q6IQ49 451 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 ACOT1Q86TX2 421 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 REPS2Q8NFH8 660 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 ENGASEQ8NFI3 743 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 FEZF2Q8TBJ5 459 aa14.82□□□□□ -0.04
USP3-204ENST00000540797 GUCY2CP25092 1073 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms