RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 ARHGEF37A1IGU5 675 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 C2orf71A6NGG8 1288 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 HIDE1A8MVS5 230 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 M0QZQ0 153 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 CYB561D2O14569 222 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 SYN3O14994 580 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 SPTLC1O15269 473 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 LILRB3O75022 631 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 AARSP49588 968 aaKnown RBP eCLIP16.69■□□□□ 0.26
DDB1-218ENST00000540784 PPP3CAQ08209 521 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 ZSCAN23Q3MJ62 389 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 ZACNQ401N2 412 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 DCAF17Q5H9S7 520 aaPredicted RBP16.69■□□□□ 0.26
DDB1-218ENST00000540784 TDRD10Q5VZ19 366 aaKnown RBP16.69■□□□□ 0.26
DDB1-218ENST00000540784 PDXDC1Q6P996 788 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 GPR65Q8IYL9 337 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 SENP8Q96LD8 212 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 EMILIN2Q9BXX0 1053 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 THAP9Q9H5L6 903 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
DDB1-218ENST00000540784 PCDHGC5Q9Y5F6 944 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 IRAK3Q9Y616 596 aa16.69■□□□□ 0.26
DDB1-218ENST00000540784 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.68■□□□□ 0.26
DDB1-218ENST00000540784 TKTP29401 623 aaKnown RBP16.68■□□□□ 0.26
DDB1-218ENST00000540784 ATICP31939 592 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 MARSP56192 900 aaKnown RBP16.68■□□□□ 0.26
DDB1-218ENST00000540784 MYL6P60660 151 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 NCOA4Q13772 614 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 PTPN14Q15678 1187 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 CCDC85BQ15834 202 aaPredicted RBP16.68■□□□□ 0.26
DDB1-218ENST00000540784 SGSM1Q2NKQ1 1148 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 ANO6Q4KMQ2 910 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 TCEAL5Q5H9L2 206 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 RTP2Q5QGT7 225 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 KRT39Q6A163 491 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 C15orf39Q6ZRI6 1047 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 C11orf57Q6ZUT1 292 aaPredicted RBP16.68■□□□□ 0.26
DDB1-218ENST00000540784 ANKS3Q6ZW76 656 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 RBM23Q86U06 439 aaKnown RBP16.68■□□□□ 0.26
DDB1-218ENST00000540784 METTL23Q86XA0 190 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 FAM114A1Q8IWE2 563 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 LNX1Q8TBB1 728 aaPredicted RBP16.68■□□□□ 0.26
DDB1-218ENST00000540784 PPM1EQ8WY54 764 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 TMEM8AQ9HCN3 771 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.68■□□□□ 0.26
DDB1-218ENST00000540784 CHD7Q9P2D1 2997 aa16.68■□□□□ 0.26
DDB1-218ENST00000540784 H7C4K7 107 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 PER2O15055 1255 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 HUS1O60921 280 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 ODC1P11926 461 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 CREMQ03060 361 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 VARS2Q5ST30 1063 aaKnown RBP16.67■□□□□ 0.26
DDB1-218ENST00000540784 PRSS55Q6UWB4 352 aaPredicted RBP16.67■□□□□ 0.26
DDB1-218ENST00000540784 IRF2BP1Q8IU81 584 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 TRIM59Q8IWR1 403 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 PIK3R5Q8WYR1 880 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 KLHL5Q96PQ7 755 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 IGFLR1Q9H665 355 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 RXFP1Q9HBX9 757 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 GDAP2Q9NXN4 497 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 DSEQ9UL01 958 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 STXBP5LQ9Y2K9 1186 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 NFE2L3Q9Y4A8 694 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDB1-218ENST00000540784 TIMM13Q9Y5L4 95 aaPredicted RBP16.67■□□□□ 0.26
DDB1-218ENST00000540784 SNX9Q9Y5X1 595 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 ANK1P16157 1881 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 MYO9BQ13459 2157 aa16.67■□□□□ 0.26
DDB1-218ENST00000540784 NCK2O43639 380 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 CLSTN1O94985 981 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 VNN1O95497 513 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 HLA-DRAP01903 254 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 CNPP09543 421 aaKnown RBP16.66■□□□□ 0.26
DDB1-218ENST00000540784 TYMPP19971 482 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 KLRC2P26717 231 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 MTIF2P46199 727 aaKnown RBP16.66■□□□□ 0.26
DDB1-218ENST00000540784 NRIP1P48552 1158 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 YWHAHQ04917 246 aaPredicted RBP16.66■□□□□ 0.26
DDB1-218ENST00000540784 MRPL58Q14197 206 aaKnown RBP16.66■□□□□ 0.26
DDB1-218ENST00000540784 PSMD5Q16401 504 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 WDR72Q3MJ13 1102 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 ADGRD2Q7Z7M1 963 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 TAF4BQ92750 862 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 SLC35C1Q96A29 364 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 CNOT6LQ96LI5 555 aaKnown RBP16.66■□□□□ 0.26
DDB1-218ENST00000540784 CDCA3Q99618 268 aaPredicted RBP16.66■□□□□ 0.26
DDB1-218ENST00000540784 FUCA2Q9BTY2 467 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 SAMSN1Q9NSI8 373 aaKnown RBP16.66■□□□□ 0.26
DDB1-218ENST00000540784 FNIP2Q9P278 1114 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 BACE2Q9Y5Z0 518 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 SZT2Q5T011 3432 aa16.66■□□□□ 0.26
DDB1-218ENST00000540784 PDCD11Q14690 1871 aaKnown RBP16.65■□□□□ 0.26
DDB1-218ENST00000540784 PLXNA4Q9HCM2 1894 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 TEX28O15482 410 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
DDB1-218ENST00000540784 OAZ2O95190 189 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 STAU1O95793 577 aaKnown RBP16.65■□□□□ 0.26
DDB1-218ENST00000540784 CYP11A1P05108 521 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 PIK3CAP42336 1068 aa16.65■□□□□ 0.26
DDB1-218ENST00000540784 MXI1P50539 228 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms