RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CTNNAL1Q9UBT7 734 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 PNMA3Q9UL41 463 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 KPNA7A9QM74 516 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 CRCPO75575 148 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 AP3M2P53677 418 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 PSMC6P62333 389 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 STX3Q13277 289 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 EXD1Q8NHP7 514 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 RIT2Q99578 217 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 ADPGKQ9BRR6 497 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 LRRC19Q9H756 370 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 MYO3BQ8WXR4 1341 aa13.7□□□□□ -0.22
DNMT1-203ENST00000540357 DCDC2CA8MYV0 355 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 CFLARO15519 480 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 PEX5P50542 639 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 EIF3EP60228 445 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 PDE1CQ14123 709 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 ZNF268Q14587 947 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 ZCWPW2Q504Y3 356 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 HYIQ5T013 277 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 PRPF39Q86UA1 669 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 SCUBE1Q8IWY4 988 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 FEZF2Q8TBJ5 459 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 PPWD1Q96BP3 646 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 SEPT10Q9P0V9 454 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 ZNF212Q9UDV6 495 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 NOP56O00567 594 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 DDX3YO15523 660 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 SNRPAP09012 282 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 OSBPP22059 807 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 GTF2H1P32780 548 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 POTEAQ6S8J7 498 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 E2F7Q96AV8 911 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 LRRC4BQ9NT99 713 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 GPC4O75487 556 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 PROSCO94903 275 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 SERPINB9P50453 376 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 TRMT5Q32P41 509 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 FAM160B1Q5W0V3 765 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 KCNK16Q96T55 309 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 MTERF2Q49AM1 385 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 LRRC74BQ6ZQY2 392 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 SCG3Q8WXD2 468 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 DHX38Q92620 1227 aaKnown RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 KRT35Q92764 455 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 HIC2Q96JB3 615 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 LBHD1Q9BQE6 289 aaPredicted RBP13.69□□□□□ -0.22
DNMT1-203ENST00000540357 TMEM120AQ9BXJ8 343 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 CYP4F11Q9HBI6 524 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 PICK1Q9NRD5 415 aa13.69□□□□□ -0.22
DNMT1-203ENST00000540357 H0YIN7 160 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 FKBP6O75344 327 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 EIF2AK2P19525 551 aaKnown RBP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 ROR2Q01974 943 aaKnown RBP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 CLEC16AQ2KHT3 1053 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 MDH1BQ5I0G3 518 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 OR6B2Q6IFH4 312 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 RAPH1Q70E73 1250 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 ZNF398Q8TD17 642 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 HAS1Q92839 578 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 TLK1Q9UKI8 766 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 ZC3H11AO75152 810 aaKnown RBP eCLIP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 ABHD2P08910 425 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 VCAM1P19320 739 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 YARSP54577 528 aaKnown RBP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 KLF6Q99612 283 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 TMEM59LQ9UK28 342 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 NDUFB10O96000 172 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 MCL1Q07820 350 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 ITPK1Q13572 414 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 CNGA3Q16281 694 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 ACAD11Q709F0 780 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 MAB21L3Q8N8X9 362 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 CMTM5Q96DZ9 223 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 FRMD8Q9BZ67 464 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 NXF1Q9UBU9 619 aaKnown RBP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 CRYBG1Q9Y4K1 1723 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 FAM196BA6NMK8 535 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 PTDSS1P48651 473 aaKnown RBP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 FAM196AQ6ZSG2 479 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 SLC47A2Q86VL8 602 aa13.68□□□□□ -0.22
DNMT1-203ENST00000540357 ZCCHC9Q8N567 271 aaKnown RBP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 TSPYL2Q9H2G4 693 aaPredicted RBP13.68□□□□□ -0.22
DNMT1-203ENST00000540357 WEE2P0C1S8 567 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 CDC25CP30307 473 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 PSMC1P62191 440 aaKnown RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 CYLC2Q14093 348 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 BMT2Q1RMZ1 405 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 SLFN11Q7Z7L1 901 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.67□□□□□ -0.227e-6■■■□□ 16.3
DNMT1-203ENST00000540357 LRMDAQ9H2I8 198 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 MMADHCQ9H3L0 296 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 KCNMB3Q9NPA1 279 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 TAGLN3Q9UI15 199 aa13.67□□□□□ -0.22
DNMT1-203ENST00000540357 MAPTP10636 758 aaKnown RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 PECAM1P16284 738 aaPredicted RBP13.67□□□□□ -0.22
DNMT1-203ENST00000540357 KPNA2P52292 529 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms